Clone BS19541 Report

Search the DGRC for BS19541

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:195
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptCG31861-RA
Protein status:BS19541.pep: full length peptide match
Sequenced Size:521

Clone Sequence Records

BS19541.complete Sequence

521 bp assembled on 2011-01-27

GenBank Submission: KX800330

> BS19541.complete
GAAGTTATCAGTCGACATGGGAAAGTCTACTGGATCGTCGTTTAAGCCCG
TCAAGCGTCTCAATAGAAAAATTAAAGAACCTGTTTCTCCAAAACTATCT
GCCAACCAAAATGTTACTCCCACCAGGCGGATTAAACGAATCAATACTCC
GGTGGCTGTCGATCCAAGTCCAAGTCCATCGGTGGTGGCGCGTCGAGCTC
GTACCAGTGCGGCATTAAAGAGTTTTATTAACAAATACAGGAGAGAACAT
CCTGGAAAGCTGCGCGCTGAGGTCGTCTCCATTTGGCGCAAAATGAGCGT
CGAAGAAAAGCAAGCCTTTCAAAGAATCGGCACAATTCAAGAAACTCCAA
CACACGTGCATTTTGAGGAGGAGGAAGTTCCTGTACCCATTTCCAATGAT
GTTATAGATATAGTTGAAGTTAGCCCACCGATACCGGAGAGAAACCCCTC
GATTTTTAGATATTTTTTAAATGCGATTAATAGGGCCTTGCATATGTTTT
ACTAAAAGCTTTCTAGACCAT

BS19541.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG31861-RA 489 CG31861-PA 1..489 17..505 2445 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG31861-RA 764 CG31861-RA 166..655 17..506 2450 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12162007..12162496 17..506 2450 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:45:25 has no hits.

BS19541.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:57 Download gff for BS19541.complete
Subject Subject Range Query Range Percent Splice Strand
CG31861-RA 138..624 17..503 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:44 Download gff for BS19541.complete
Subject Subject Range Query Range Percent Splice Strand
CG31861-RA 138..624 17..503 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:01 Download gff for BS19541.complete
Subject Subject Range Query Range Percent Splice Strand
CG31861-RA 166..652 17..503 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:01 Download gff for BS19541.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12162007..12162493 17..503 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:44 Download gff for BS19541.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12162007..12162493 17..503 100   Plus

BS19541.pep Sequence

Translation from 16 to 504

> BS19541.pep
MGKSTGSSFKPVKRLNRKIKEPVSPKLSANQNVTPTRRIKRINTPVAVDP
SPSPSVVARRARTSAALKSFINKYRREHPGKLRAEVVSIWRKMSVEEKQA
FQRIGTIQETPTHVHFEEEEVPVPISNDVIDIVEVSPPIPERNPSIFRYF
LNAINRALHMFY*

BS19541.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG31861-PA 162 CG31861-PA 1..162 1..162 829 100 Plus