BS19543.complete Sequence
569 bp assembled on 2011-01-27
GenBank Submission: KX801294
> BS19543.complete
GAAGTTATCAGTCGACATGGCAGAAGATTCTGCAGAGGACCAGATTACCT
GGCCGGATGACATTGCCGAGCCAACCTTGGAGTCTGAGTTGACCTGGCCC
AATGAACTTCCGGTAACAGTAACTAATGGCATGACTTTTCGCACCGCTCG
AACCTTGGATCATTTCGATGCTTTGCGAGACGATGACGAGTTCATGGAGA
ACCCGCATAAAAAGGTTTTTGACGAATTTGATAGCCTGGAGCATAGATAC
CACATCGTTCATCCAATAGGTGAAGAAATAGCCCTCAAGCGGAACCCGCT
CCCTGAGGAGAAGTATATCAAGCAGCCCTTCAAGTTCGGCTGCTGTCACA
ACTCCACATATGTGGGATGTGCTGGCGTTTGTCCGGAGACATGCGAATAC
CGCTCCAAATACTGTGTACCGCTTTGCGGACCGCCTTGTCGCTGTAAGCG
TGGTTATGTCTACAATATTCCACATAGCGCATGTACTCTGCGCTCCGACT
GTCCCAAGGGGATCGTTCAGAGTAAGAACGGGATATACAGGGTATTTTTG
TGAAAGCTTTCTAGACCAT
BS19543.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5267-RA | 537 | CG5267-PA | 1..537 | 17..553 | 2685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5267-RA | 723 | CG5267-RA | 63..599 | 17..553 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16755163..16755699 | 17..553 | 2685 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:45:44 has no hits.
BS19543.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:58 Download gff for
BS19543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5267-RA | 63..598 | 17..552 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:53 Download gff for
BS19543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5267-RA | 63..598 | 17..552 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:08 Download gff for
BS19543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5267-RA | 63..598 | 17..552 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:08 Download gff for
BS19543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16755163..16755698 | 17..552 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:53 Download gff for
BS19543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12642668..12643203 | 17..552 | 100 | | Plus |
BS19543.pep Sequence
Translation from 16 to 552
> BS19543.pep
MAEDSAEDQITWPDDIAEPTLESELTWPNELPVTVTNGMTFRTARTLDHF
DALRDDDEFMENPHKKVFDEFDSLEHRYHIVHPIGEEIALKRNPLPEEKY
IKQPFKFGCCHNSTYVGCAGVCPETCEYRSKYCVPLCGPPCRCKRGYVYN
IPHSACTLRSDCPKGIVQSKNGIYRVFL*
BS19543.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5267-PA | 178 | CG5267-PA | 1..178 | 1..178 | 1003 | 100 | Plus |
CG34189-PA | 122 | CG34189-PA | 43..121 | 99..177 | 193 | 48.1 | Plus |
Acp62F-PA | 115 | CG1262-PA | 31..97 | 106..171 | 181 | 50.7 | Plus |
CG33259-PA | 119 | CG33259-PA | 24..88 | 106..169 | 172 | 50.8 | Plus |