BS19544.complete Sequence
512 bp assembled on 2011-01-27
GenBank Submission: KX804953
> BS19544.complete
GAAGTTATCAGTCGACATGCACCGATCACACCCGAGTATCAGTCGTCGCA
AGCATCTCATGAAGGAGATGATGGAGGACGACTACGCGCTGCCCACAGAA
ACTCAGCAGATTGCGCGGGTCATCAGCAGTCGGGGCAACAATCTCCACGA
GGTGGAGACCGTGGACGAAACGTTCCTTGTTTCGATGCCCAACAAATTCC
GCAAGAGCATGTGGGTGAAACGTGGCGACTTTCTGCTGGTCGAACCGATT
GAGGAGGGCGATAAAGTCAAAGCCGAGATTTGCAAAATACTCACACCCGA
ACATATAAAGGAATACACAAAAGCTGCAATTTGGCCGGATAAATTCACAA
AGAAACCTGTACAGGAGGAAGCCACCAGCCAAAACAAAGACGACTCCGAT
TTCGAGGATGATCTCCTGCCCAATACAAATCGGCCTGTAAATCGCGATTC
CTCCGACGAAGAGGAAGATGAGGAAACATCCAGCGAAGAGGACTGAAAGC
TTTCTAGACCAT
BS19544.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31957-RB | 480 | CG31957-PB | 1..480 | 17..496 | 2400 | 100 | Plus |
CG31957-RA | 480 | CG31957-PA | 1..480 | 17..496 | 2400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31957-RB | 885 | CG31957-RB | 124..604 | 17..497 | 2405 | 100 | Plus |
CG31957-RA | 676 | CG31957-RA | 124..604 | 17..497 | 2405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3871552..3871870 | 497..179 | 1595 | 100 | Minus |
2L | 23513712 | 2L | 3872173..3872335 | 179..17 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:58 has no hits.
BS19544.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:58 Download gff for
BS19544.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31957-RA | 124..602 | 17..495 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:57 Download gff for
BS19544.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31957-RA | 124..602 | 17..495 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:12 Download gff for
BS19544.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31957-RA | 124..602 | 17..495 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:12 Download gff for
BS19544.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3872173..3872335 | 17..179 | 100 | | Minus |
2L | 3871554..3871869 | 180..495 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:57 Download gff for
BS19544.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3872173..3872335 | 17..179 | 100 | | Minus |
arm_2L | 3871554..3871869 | 180..495 | 100 | <- | Minus |
BS19544.pep Sequence
Translation from 16 to 495
> BS19544.pep
MHRSHPSISRRKHLMKEMMEDDYALPTETQQIARVISSRGNNLHEVETVD
ETFLVSMPNKFRKSMWVKRGDFLLVEPIEEGDKVKAEICKILTPEHIKEY
TKAAIWPDKFTKKPVQEEATSQNKDDSDFEDDLLPNTNRPVNRDSSDEEE
DEETSSEED*
BS19544.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31957-PB | 159 | CG31957-PB | 1..159 | 1..159 | 833 | 100 | Plus |
CG31957-PA | 159 | CG31957-PA | 1..159 | 1..159 | 833 | 100 | Plus |