BS19547.complete Sequence
692 bp assembled on 2011-01-27
GenBank Submission: KX804909
> BS19547.complete
GAAGTTATCAGTCGACATGTTTCGAATCCACTGCAACAAATGCTTTCGAC
GCCGCAACGTCGAGCCAACGTTGATCTTCCACATGACCCAGTGCCAACAC
GTCCTCTGCGCCTCCTGTCTGAGCGAATCCTCGACAGATAAGAAGTGCCC
ACTGTGCAAACGGGATCTGCGAGCGATTCCGATCGACAAAAACTTGCCTC
CAAACGTGGCCCAATACTTTGAGGATCCGCTTCGATTCCAGCAGCTCTAC
CGCAAGATCAGCAAGTTCCAGGCCGACCAGCGGGCATCGGACAACCTGGG
ATTCTATCGCCAGATGCAGGAGCACGAGAAGAACGAGAGCCGCTTAAAGG
GCTTCTGCAAGATGGAGGCGCAGTTCAACCAGCAGATCCAAAAGGAGAAG
GAACGGATCGCCGAACTTCGCGCCTACATAAAGTACCACGAAGAGGAGGG
TCTCAAGGAGTGGCCACACGCCACGGGGGTTGAGAAGCCCTGGAGCAACC
AGGCACGTGGCCTGCGGCCCAGGACACCCTCTGTGACCACATCGGATAAT
ACCCAGTCGGATGAGCACATGACAACCTTCTGCCTGGACTCGGACATAGA
TTGCCTTGAAGAAGACGAACCCCGCCGATACGTCAAGAAAACCTTTAACG
GAAACATCAAAGATTTTCACATATAAAAGCTTTCTAGACCAT
BS19547.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31053-RA | 660 | CG31053-PA | 1..660 | 17..676 | 3300 | 100 | Plus |
CG12200-RA | 636 | CG12200-PA | 1..413 | 17..429 | 535 | 75.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31053-RA | 818 | CG31053-RA | 19..678 | 17..676 | 3300 | 100 | Plus |
CG12200-RA | 993 | CG12200-RA | 105..517 | 17..429 | 535 | 75.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27927497..27928156 | 676..17 | 3300 | 100 | Minus |
X | 23542271 | X | 19475167..19475579 | 17..429 | 535 | 75.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:46:12 has no hits.
BS19547.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:00 Download gff for
BS19547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31053-RA | 25..676 | 23..674 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:44:03 Download gff for
BS19547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31053-RA | 25..676 | 23..674 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:16 Download gff for
BS19547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31053-RA | 25..676 | 23..674 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:16 Download gff for
BS19547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27927499..27928150 | 23..674 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:44:03 Download gff for
BS19547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23753221..23753872 | 23..674 | 100 | | Minus |
BS19547.pep Sequence
Translation from 16 to 675
> BS19547.pep
MFRIHCNKCFRRRNVEPTLIFHMTQCQHVLCASCLSESSTDKKCPLCKRD
LRAIPIDKNLPPNVAQYFEDPLRFQQLYRKISKFQADQRASDNLGFYRQM
QEHEKNESRLKGFCKMEAQFNQQIQKEKERIAELRAYIKYHEEEGLKEWP
HATGVEKPWSNQARGLRPRTPSVTTSDNTQSDEHMTTFCLDSDIDCLEED
EPRRYVKKTFNGNIKDFHI*
BS19547.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31053-PA | 219 | CG31053-PA | 1..219 | 1..219 | 1193 | 100 | Plus |
CG12200-PA | 211 | CG12200-PA | 1..211 | 1..219 | 555 | 50 | Plus |