Clone BS19548 Report

Search the DGRC for BS19548

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:195
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptCG30324-RA
Protein status:BS19548.pep: full length peptide match
Sequenced Size:527

Clone Sequence Records

BS19548.complete Sequence

527 bp assembled on 2011-01-27

GenBank Submission: KX804599

> BS19548.complete
GAAGTTATCAGTCGACATGTTTTCCGATCCCGCCCAGGAGTCGGTTGCCA
CGCAGACGGAGGCACAACCGGTTCCGTCGCCCATCTGCACCCCACTGCTG
ATGGTGGACGAGGATGGACGAAAGCGGTACTGCTACCATGGTGGAAAATG
CAAGTGTGCCACTTGCGCACAAATTCGTGCAGAGCAGGCAGTGAAACTCG
ACCAGGAGCTGCTGTCCTACATACCGCACTCGAAGCTCCACCTGGAAGTT
CCAATCCGAATGGCCAAGCCGAAGCAGTATCGCCTGGAAGCTCGACGGGC
TACTCCCGAACTGGCAAAATTTCTGCGGGAGGATCACGAGAGGCTGAGGG
CGGAGTATCCATCGTACTATCTCCCGGATCGATACTTTGGTAAGAAATTC
TACGAGTTGCCAGGACCGCAGCACAAGGAGACCCAGACGGACATTCCGAT
TGGGCGTTACGGCATCGATGGTTGTCCCTGTACCAATAAATCGCTCTGCT
ATGACTTGTAAAAGCTTTCTAGACCAT

BS19548.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:57:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG30324-RA 495 CG30324-PA 1..495 17..511 2475 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG30324-RA 648 CG30324-RA 94..588 17..511 2475 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16287646..16288140 511..17 2475 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:57:35 has no hits.

BS19548.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:41 Download gff for BS19548.complete
Subject Subject Range Query Range Percent Splice Strand
CG30324-RA 101..586 24..509 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:06:51 Download gff for BS19548.complete
Subject Subject Range Query Range Percent Splice Strand
CG30324-RA 101..586 24..509 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:50 Download gff for BS19548.complete
Subject Subject Range Query Range Percent Splice Strand
CG30324-RA 101..586 24..509 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:50 Download gff for BS19548.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16287648..16288133 24..509 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:06:51 Download gff for BS19548.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12175153..12175638 24..509 100   Minus

BS19548.pep Sequence

Translation from 16 to 510

> BS19548.pep
MFSDPAQESVATQTEAQPVPSPICTPLLMVDEDGRKRYCYHGGKCKCATC
AQIRAEQAVKLDQELLSYIPHSKLHLEVPIRMAKPKQYRLEARRATPELA
KFLREDHERLRAEYPSYYLPDRYFGKKFYELPGPQHKETQTDIPIGRYGI
DGCPCTNKSLCYDL*

BS19548.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG30324-PA 164 CG30324-PA 1..164 1..164 895 100 Plus