Clone BS19549 Report

Search the DGRC for BS19549

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:195
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG32590-RA
Protein status:BS19549.pep: full length peptide match
Sequenced Size:584

Clone Sequence Records

BS19549.complete Sequence

584 bp assembled on 2011-01-27

GenBank Submission: KX804615

> BS19549.complete
GAAGTTATCAGTCGACATGTCGCGCGGCAACGAATTGGTATTCAAAGCGA
AGAAAACATCAGAGAAGATATCGGAGAACATACACATATTCGCCAACGAT
CCATCGCTGGCGTTTTTCCGTGTGCAGGAGCACGTTCGCAAGGTTACCCC
AGCGATTTTCGAGAAACGCGATGAAGTCTTTCAGCTGCAAAATAATCTCC
AGGGACATTGCTATGATATGGAATACGGCATACAAGCGCTGCGAACGATT
GAAAAATCGGAGAGCATATTTGAGAACATCCAGGAAATGATCAAGGCTTC
AATATTCCTCAAGCAGCAGCTAAAGTACGAGGAGAGCAGAAAGAAAGTGA
AGAAGGATAGCACCAAATCTTCCGTCTACAAGCGATTCTCCGCCCATCTG
GCACTGGATCTCCCGGATTTACCCGATTTCGGTGGCGTTATGCGGGAAAC
TAGCCAGCGAATGGAGAATATGATAGGTCCTGGCACGGCAACAGGACGTA
CTGAGGCCCAGGCCGCGACATCCAGTAATCCTGGCGAGCTCCAACGATCC
TATACGACACTCCACTAGAAGCTTTCTAGACCAT

BS19549.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG32590-RA 552 CG32590-PA 1..552 17..568 2760 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32590-RA 699 CG32590-RA 72..624 17..569 2765 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14838427..14838761 569..235 1675 100 Minus
X 23542271 X 14838818..14839035 234..17 1090 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:40:00 has no hits.

BS19549.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:46 Download gff for BS19549.complete
Subject Subject Range Query Range Percent Splice Strand
CG32590-RA 97..648 17..568 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:24 Download gff for BS19549.complete
Subject Subject Range Query Range Percent Splice Strand
CG32590-RA 72..623 17..568 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:02 Download gff for BS19549.complete
Subject Subject Range Query Range Percent Splice Strand
CG32590-RA 72..623 17..568 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:02 Download gff for BS19549.complete
Subject Subject Range Query Range Percent Splice Strand
X 14838428..14838761 235..568 100 <- Minus
X 14838818..14839035 17..234 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:24 Download gff for BS19549.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14732851..14733068 17..234 100   Minus
arm_X 14732461..14732794 235..568 100 <- Minus

BS19549.pep Sequence

Translation from 16 to 567

> BS19549.pep
MSRGNELVFKAKKTSEKISENIHIFANDPSLAFFRVQEHVRKVTPAIFEK
RDEVFQLQNNLQGHCYDMEYGIQALRTIEKSESIFENIQEMIKASIFLKQ
QLKYEESRKKVKKDSTKSSVYKRFSAHLALDLPDLPDFGGVMRETSQRME
NMIGPGTATGRTEAQAATSSNPGELQRSYTTLH*

BS19549.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG32590-PA 183 CG32590-PA 1..183 1..183 930 100 Plus