BS19549.complete Sequence
584 bp assembled on 2011-01-27
GenBank Submission: KX804615
> BS19549.complete
GAAGTTATCAGTCGACATGTCGCGCGGCAACGAATTGGTATTCAAAGCGA
AGAAAACATCAGAGAAGATATCGGAGAACATACACATATTCGCCAACGAT
CCATCGCTGGCGTTTTTCCGTGTGCAGGAGCACGTTCGCAAGGTTACCCC
AGCGATTTTCGAGAAACGCGATGAAGTCTTTCAGCTGCAAAATAATCTCC
AGGGACATTGCTATGATATGGAATACGGCATACAAGCGCTGCGAACGATT
GAAAAATCGGAGAGCATATTTGAGAACATCCAGGAAATGATCAAGGCTTC
AATATTCCTCAAGCAGCAGCTAAAGTACGAGGAGAGCAGAAAGAAAGTGA
AGAAGGATAGCACCAAATCTTCCGTCTACAAGCGATTCTCCGCCCATCTG
GCACTGGATCTCCCGGATTTACCCGATTTCGGTGGCGTTATGCGGGAAAC
TAGCCAGCGAATGGAGAATATGATAGGTCCTGGCACGGCAACAGGACGTA
CTGAGGCCCAGGCCGCGACATCCAGTAATCCTGGCGAGCTCCAACGATCC
TATACGACACTCCACTAGAAGCTTTCTAGACCAT
BS19549.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32590-RA | 552 | CG32590-PA | 1..552 | 17..568 | 2760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32590-RA | 699 | CG32590-RA | 72..624 | 17..569 | 2765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14838427..14838761 | 569..235 | 1675 | 100 | Minus |
X | 23542271 | X | 14838818..14839035 | 234..17 | 1090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:40:00 has no hits.
BS19549.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:46 Download gff for
BS19549.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32590-RA | 97..648 | 17..568 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:24 Download gff for
BS19549.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32590-RA | 72..623 | 17..568 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:02 Download gff for
BS19549.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32590-RA | 72..623 | 17..568 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:02 Download gff for
BS19549.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14838428..14838761 | 235..568 | 100 | <- | Minus |
X | 14838818..14839035 | 17..234 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:24 Download gff for
BS19549.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14732851..14733068 | 17..234 | 100 | | Minus |
arm_X | 14732461..14732794 | 235..568 | 100 | <- | Minus |
BS19549.pep Sequence
Translation from 16 to 567
> BS19549.pep
MSRGNELVFKAKKTSEKISENIHIFANDPSLAFFRVQEHVRKVTPAIFEK
RDEVFQLQNNLQGHCYDMEYGIQALRTIEKSESIFENIQEMIKASIFLKQ
QLKYEESRKKVKKDSTKSSVYKRFSAHLALDLPDLPDFGGVMRETSQRME
NMIGPGTATGRTEAQAATSSNPGELQRSYTTLH*
BS19549.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32590-PA | 183 | CG32590-PA | 1..183 | 1..183 | 930 | 100 | Plus |