BS19550.complete Sequence
635 bp assembled on 2011-01-27
GenBank Submission: KX800838
> BS19550.complete
GAAGTTATCAGTCGACATGGATTCGCTGCTCCAGAAGATCTCAGAGCTGT
TTCATAACTTTACTTCCCCCATTGCAGCGGTGGTATACAGTCCTAAGAAT
GTAGAGAATGCACAAGAAACCCAAACCACTGCAAACCAAATACCAGAAGC
TTCGAGCCAGGAAACTGGGAAGCCGGACTCTGATCGAACTGCACCTGATA
CCACTGAACCCCTAACCTCTGGTGATATTCCAACCCCAGATGTCAAGTTG
CAAAAGTTTAGGGAACAAACGGCTCCAGCTTTAAACTACGAGCTAGAGTT
TGTTGACTTCGTAGATCGCAACGCACCTCAGGGTCTATCGAAGAAGATAA
TTGATATATTGCCCTATCTGGAGGTCAGCTTTTTGTCCTGGCCAGCGTTT
TGGATTTGGCGCGGCTACAACTGGCAGTCCGCACGAAAAACGGAGAGAAT
CGCATTTTACATTCAAAGGACCTATCAACAGGCCAAGCTAATGCAGTTGG
CTATCTTAGCCACTGGTCTGTTCACGATATCAATGGGTCGACCTGCCGGC
ATACCAATAGAAATGCATACAGTGCACAATAATCAGGAAGAAACAGCTGA
CATCGGAGACTCCTCTTAGAAGCTTTCTAGACCAT
BS19550.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32298-RB | 603 | CG32298-PB | 1..603 | 17..619 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32299-RB | 1205 | CG32299-RB | 54..657 | 16..619 | 3020 | 100 | Plus |
| CG32298-RB | 1205 | CG32298-RB | 54..657 | 16..619 | 3020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2390483..2390936 | 469..16 | 2270 | 100 | Minus |
| 3L | 28110227 | 3L | 2390274..2390424 | 619..469 | 755 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:40:16 has no hits.
BS19550.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:47 Download gff for
BS19550.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32299-RB | 55..657 | 17..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:30 Download gff for
BS19550.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32298-RB | 55..657 | 17..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:08 Download gff for
BS19550.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32298-RB | 55..657 | 17..619 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:08 Download gff for
BS19550.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2390274..2390423 | 470..619 | 100 | <- | Minus |
| 3L | 2390483..2390935 | 17..469 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:30 Download gff for
BS19550.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2390274..2390423 | 470..619 | 100 | <- | Minus |
| arm_3L | 2390483..2390935 | 17..469 | 100 | | Minus |
BS19550.pep Sequence
Translation from 16 to 618
> BS19550.pep
MDSLLQKISELFHNFTSPIAAVVYSPKNVENAQETQTTANQIPEASSQET
GKPDSDRTAPDTTEPLTSGDIPTPDVKLQKFREQTAPALNYELEFVDFVD
RNAPQGLSKKIIDILPYLEVSFLSWPAFWIWRGYNWQSARKTERIAFYIQ
RTYQQAKLMQLAILATGLFTISMGRPAGIPIEMHTVHNNQEETADIGDSS
*
BS19550.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32298-PB | 200 | CG32298-PB | 1..200 | 1..200 | 1040 | 100 | Plus |
