BS19555.complete Sequence
857 bp assembled on 2011-01-27
GenBank Submission: KX803629
> BS19555.complete
GAAGTTATCAGTCGACATGTTCACGGTCACGTCGGAGATCTACGGAGAGA
ACAACTACCAGACGACCCGCGATGGAGGTAAGGTGTTGTCGAAGTTCCGT
TTCGTCTATCCGGAGGAGAAGCTGGCGGGGATTAGGACGGATAAAGACGG
CGACCTTGAGGTGCCAAGGCCGAAACGTGGCGTGATCGAATTGGAACATT
CCGAGGCCACGGAGCTCCGGCTGGTGGGCTTGCAGGTGTGGCGAGGAGCC
CTTCTTCTGGCAGACTACCTTTTCTCCAAAAAGGATGAGTTTTCCCAGAA
AACCCTAATGGAACTGGGAGCTGGTGTCGGCCTGACCAGCATTGCCGCCG
GAATACACAATAACGGAAGGATCTATTGCACGGATGTGGACCTGGGATGC
ATACTGAAGCTGATCCGCGGCAATGTCCAAAGAAATTCAAAACTCCTCCG
CGCTACGATATCAGTTCTGGAGTTTGATTTTCTCGCCTCAAAAGAGGATC
ACTCGCAGGATCTGCTGGAGGCCATAGACAATAGCGATATAATCCTAGCT
GCCGATGTCATCTACTGTGATACGCTAACCGATGCCTTCATCTGCGTCTT
GGATAACCTCCTGGATCGAGGTCGCCAAACTGGGAGACCCAAAACGATAT
ACATGGCACTGGAGAAGCGCTATGTGTTCACACTGGAGGATTGCGATTCG
GTGGCTCCCATGTATGAGTACCTCATCCGGCAGACGGTGAACAAGCCGTG
GATCATGGAGCACCTGCCTCTGGATTTCCCCCAGTATTTCGAGTACGATC
GCTGCAAGCAACTGGTTCTGATGAAGATCATCAGTCGTTAAAAGCTTTCT
AGACCAT
BS19555.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10584-RA | 825 | CG10584-PA | 1..825 | 17..841 | 4125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10584-RA | 1081 | CG10584-RA | 111..938 | 16..843 | 4140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21030423..21031250 | 843..16 | 4140 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:40:33 has no hits.
BS19555.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:47 Download gff for
BS19555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10584-RA | 117..934 | 22..839 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:36 Download gff for
BS19555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10584-RA | 117..934 | 22..839 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:14 Download gff for
BS19555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10584-RA | 117..934 | 22..839 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:14 Download gff for
BS19555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21030427..21031244 | 22..839 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:36 Download gff for
BS19555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21023527..21024344 | 22..839 | 100 | | Minus |
BS19555.pep Sequence
Translation from 16 to 840
> BS19555.pep
MFTVTSEIYGENNYQTTRDGGKVLSKFRFVYPEEKLAGIRTDKDGDLEVP
RPKRGVIELEHSEATELRLVGLQVWRGALLLADYLFSKKDEFSQKTLMEL
GAGVGLTSIAAGIHNNGRIYCTDVDLGCILKLIRGNVQRNSKLLRATISV
LEFDFLASKEDHSQDLLEAIDNSDIILAADVIYCDTLTDAFICVLDNLLD
RGRQTGRPKTIYMALEKRYVFTLEDCDSVAPMYEYLIRQTVNKPWIMEHL
PLDFPQYFEYDRCKQLVLMKIISR*
BS19555.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10584-PA | 274 | CG10584-PA | 1..274 | 1..274 | 1418 | 100 | Plus |