BS19559.complete Sequence
896 bp assembled on 2011-01-27
GenBank Submission: KX802793
> BS19559.complete
GAAGTTATCAGTCGACATGATCCACAAGAGCATAGCCCACCTGCTGGGAC
TGGCAGTGATCATGTTAATGATGTGGAAGCCCACACCCACGGATAGCTAC
GCCGTGGGACAATCGAAGTACGGCAGGATCGAGAAGTTCCCCTACCAGGT
GATGCTCATCGGCAAGCAGCTATGGCGCAAACGGATTCTGTGCGGCGGCA
CACTGCTGGACAAACGTTGGATCCTAACAGCTGGACACTGCACCATGGGC
GTGACCCACTACGATGTGTATCTGGGCACCAAGAGCGTGGAGGATACGGA
GGTGTCCGGCGGTCTGGTGCTCCGCTCCAACAAGTTCATCGTGCACGAAC
GTTTCAATCCGGAGACGGCGGCCAATGATATTGCGCTGGTCAAGCTGCCG
CAGGATGTGGCATTCACACCGCGAATTCAGCCCGCCTCGCTGCCAAGCAG
ATATCGACATGACCAGTTCGCGGGCATGAGCGTGGTGGCCAGCGGATGGG
GCGCCATGGTGGAGATGACCAACTCGGACTCGATGCAGTACACCGAGCTG
AAGGTGATCTCAAATGCGGAGTGCGCCCAGGAGTACGATGTGGTCACGTC
GGGAGTGATCTGTGCCAAGGGCCTGAAGGATGAGACAGTGTGCACTGGTG
ACTCTGGCGGTCCACTCGTTCTCAAGGACACTCAAATAGTGGTGGGCATA
ACCAGTTTCGGGCCAGCCGATGGTTGTGAGACCAATATTCCCGGAGGCTT
CACCCGCGTCACACACTATCTGGACTGGATCGAGAGCAAGATTGGTAGCC
ATGGCCAAGTACATCAGCAGTACCTGCGACCACAGCAGCAACATCACCAC
CATCAGTACAGTGATAACAATCTCATTTAGAAGCTTTCTAGACCAT
BS19559.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:39:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11529-RA | 864 | CG11529-PA | 1..864 | 17..880 | 4320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11529-RA | 1240 | CG11529-RA | 117..980 | 17..880 | 4320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12197907..12198770 | 17..880 | 4320 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:39:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1511..1573 | 805..869 | 140 | 70.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2837 | 812..861 | 135 | 76.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2574..2665 | 765..849 | 128 | 65.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6825 | 775..858 | 127 | 64 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6804..6876 | 785..858 | 124 | 64.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..6804 | 785..858 | 123 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6793 | 806..870 | 121 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6785..6846 | 806..869 | 117 | 67.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1132..1176 | 826..870 | 117 | 73.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1100..1161 | 806..869 | 117 | 67.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1100..1159 | 812..876 | 115 | 69.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2350 | 812..858 | 111 | 74.5 | Plus |
BS19559.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:45 Download gff for
BS19559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11529-RA | 117..980 | 17..880 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:06 Download gff for
BS19559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11529-RA | 117..980 | 17..880 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:44 Download gff for
BS19559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11529-RA | 117..980 | 17..880 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:44 Download gff for
BS19559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12197907..12198770 | 17..880 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:06 Download gff for
BS19559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12191007..12191870 | 17..880 | 100 | | Plus |
BS19559.pep Sequence
Translation from 16 to 879
> BS19559.pep
MIHKSIAHLLGLAVIMLMMWKPTPTDSYAVGQSKYGRIEKFPYQVMLIGK
QLWRKRILCGGTLLDKRWILTAGHCTMGVTHYDVYLGTKSVEDTEVSGGL
VLRSNKFIVHERFNPETAANDIALVKLPQDVAFTPRIQPASLPSRYRHDQ
FAGMSVVASGWGAMVEMTNSDSMQYTELKVISNAECAQEYDVVTSGVICA
KGLKDETVCTGDSGGPLVLKDTQIVVGITSFGPADGCETNIPGGFTRVTH
YLDWIESKIGSHGQVHQQYLRPQQQHHHHQYSDNNLI*
BS19559.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11529-PA | 287 | CG11529-PA | 1..287 | 1..287 | 1530 | 100 | Plus |
| CG10472-PA | 290 | CG10472-PA | 57..284 | 40..260 | 428 | 41.6 | Plus |
| Jon65Aiv-PA | 271 | CG6467-PA | 46..270 | 38..260 | 425 | 40.8 | Plus |
| CG10477-PB | 272 | CG10477-PB | 27..269 | 24..260 | 422 | 40.6 | Plus |
| CG10477-PA | 272 | CG10477-PA | 27..269 | 24..260 | 422 | 40.6 | Plus |
