BS19564.complete Sequence
1052 bp assembled on 2011-01-27
GenBank Submission: KX805503
> BS19564.complete
GAAGTTATCAGTCGACATGCAGAGGATAATCGCTTTGGTGGCCATCATGG
CGTGTGGACTATCGTTCGTGGCAGCTCAGTCATGTCAGACTTGTCTGGAG
CAAAACGATGTGTACTGCGTTGATCAGAACAGCTATCAGAATTGCATGAA
AAATGGTCCAGTTGGAGATATTATCGAATGTCCTTCGGGCACCGTTTGCT
CCAATTCTGATAGCGTTTGTGCTCTGATCTCCGAGGTAAATTCGACCATA
TTGGACGTGTGTGGAGGCTCTGGCGGAAATGGAGCTCAGTGCGAAGTGTG
TTCCTCAGGCGCCAAATACGCCTGTGTCAGCAGCACCCAGTATGCCCGCT
GCTCCTCCGCCGGCGATGTGCTGACCAGCAGTGTGTACAATTGCGGCACA
GATGAGATTTGTATCATAGATGCTCTGTCGACGTATCAAACCGTCTGTGT
ACCGTCTTGTGCCTCCGAATTTCTTGGATTGGATGCCACCTGTAGCAACA
GTATTTATCAGCCAACCACAACAACTACAGTGGCTCCAACGACAACTCCT
AGTGCTGCGCAGAAAGAGGATTTGTGCAATGCTGGCGAGCCTAGTACCAA
TCCTAGTTACTTCTTTACCAGAATAACCGATGACTCCACGTGCAACAGCT
ACCTGTACTGCCAGAAATCTGGAACCACCTGGGTTGCCCTCTATATGACT
TGCGGCGCCTCCACGCCGTTCTTTGATTCAACCACCAGCTCATGTGTGAC
AACCAGGCCGACCAGCTGCTCGGATACAACGACTCAGTCGCCCTCTGATT
CTTCATCGACTGCTTCTTCAACTGAGTCCTCCTCCGAGTCTTCATCAACG
ACTGCTTCATCCACAGCTTCCTCATCAACGGAATCTACACCAACGACTGC
GTCCTCGTCGGCTTCTTCATCTACGGAATCCTCCACCGAGTCTTCTTCCA
CGACTGCTTCCACCACGCAGTCTTCTTCTACGGAATCATCCACACAGTCT
ACCTCAACAACTTCTACGACTACTCCTACTCCTTAAAAGCTTTCTAGACC
AT
BS19564.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13075-RB | 1020 | CG13075-PB | 1..1020 | 17..1036 | 5100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13075-RB | 1149 | CG13075-RB | 42..1063 | 15..1036 | 5110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16084615..16085178 | 473..1036 | 2820 | 100 | Plus |
| 3L | 28110227 | 3L | 16084238..16084560 | 150..472 | 1615 | 100 | Plus |
| 3L | 28110227 | 3L | 16084034..16084168 | 15..149 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:42:23 has no hits.
BS19564.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:51 Download gff for
BS19564.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RB | 44..1061 | 17..1034 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:42:26 Download gff for
BS19564.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RB | 44..1061 | 17..1034 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:56 Download gff for
BS19564.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RB | 44..1061 | 17..1034 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:56 Download gff for
BS19564.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16084036..16084168 | 17..149 | 100 | -> | Plus |
| 3L | 16084238..16084560 | 150..472 | 100 | -> | Plus |
| 3L | 16084615..16085176 | 473..1034 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:42:26 Download gff for
BS19564.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16077136..16077268 | 17..149 | 100 | -> | Plus |
| arm_3L | 16077338..16077660 | 150..472 | 100 | -> | Plus |
| arm_3L | 16077715..16078276 | 473..1034 | 100 | | Plus |
BS19564.pep Sequence
Translation from 16 to 1035
> BS19564.pep
MQRIIALVAIMACGLSFVAAQSCQTCLEQNDVYCVDQNSYQNCMKNGPVG
DIIECPSGTVCSNSDSVCALISEVNSTILDVCGGSGGNGAQCEVCSSGAK
YACVSSTQYARCSSAGDVLTSSVYNCGTDEICIIDALSTYQTVCVPSCAS
EFLGLDATCSNSIYQPTTTTTVAPTTTPSAAQKEDLCNAGEPSTNPSYFF
TRITDDSTCNSYLYCQKSGTTWVALYMTCGASTPFFDSTTSSCVTTRPTS
CSDTTTQSPSDSSSTASSTESSSESSSTTASSTASSSTESTPTTASSSAS
SSTESSTESSSTTASTTQSSSTESSTQSTSTTSTTTPTP*
BS19564.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13075-PB | 339 | CG13075-PB | 1..339 | 1..339 | 1754 | 100 | Plus |
| CG33258-PC | 252 | CG33258-PC | 1..252 | 1..252 | 675 | 50.4 | Plus |
| CG33258-PB | 252 | CG33258-PB | 1..252 | 1..252 | 675 | 50.4 | Plus |
| CG42525-PA | 419 | CG42525-PA | 18..261 | 83..338 | 275 | 32.8 | Plus |
| CG42525-PB | 377 | CG42525-PB | 18..297 | 83..338 | 265 | 31.2 | Plus |
