BS19567.complete Sequence
1040 bp assembled on 2011-01-27
GenBank Submission: KX804708
> BS19567.complete
GAAGTTATCAGTCGACATGGCGGAGGAGCTAAAAGTGTTCTTCGAAGAGT
GTCGTGGACAAGGGTTTTCCGCAAAGGAAATGCTGGCTGTATGTCAACCT
TTGATTTGGAGAATCCGCTTGGCTCGAATCAAGAAATGGTTCTTCATCCT
ACTGCCCCTGATGGTTATTTATCTGCTTTGGCTATGCAGTGACACCTTTT
CTTGGTGGCTAAGTGCCCTGGGTCGATTGGTGCTCATACAGATCCTTCCA
CTCTGGGATTGGCGGCCCTACTATCATGCCAAGTGCCTGATACCACGCGA
TCAAAGTGTCCAAGAGCAGGCACCATCATTGGGTAAAGCGGAGACCTTGC
GGCAGAATTGCGATCTCTGTGAAGGTTTGGAGGGAATAGGCACGGTTTCC
AATGTAAGCTACTCCTCCTTGGAGTCTGAGCACCTAGAACGTGGGCAACC
AGTGATTATAACAGACACTGGACTGCAAACGGATGTTTTTAGTCTCCTAG
AGCAAATAGAGAAGAAGTCACCTCAGTGGCTAACCAGTGAACCTTGTGAT
GTTTCCAGCAATCTGTTGCTGAGGAAACTTTTTAACCTAGAGGCGGCTCT
GGATAAGATTCATTCCTGGCAGGGACAGACATCGAATTCTTGGCACCTTC
AACTGAGGAACTGCCAGAAGAAGGCGGTGAAGTCCTCTCGGCTTTTTCTG
GATCGTCCCTACTACTACCCACTTCACCTGGCCCCGTATTACTCCAGCTG
GCTATTGGCAGTCCATCAGCAAAAGCGAAACCAAGCCGATATATACGTGC
GTGGCCTAGTGCTCATCCAGCAACTGAGTGGCCACTTTGAGATGGTTCTC
CATCCAAAGAAGCCCTGCAATAAAGGAATATGTCCAAGCTTGCGGATGCG
ACTGAATGCAGGAGAAGGTCTGATCTTTACCACGGATATCTGGAGCCTAA
GTTATGGTCTGGAGAAACCCCACGGAAAGCTGACCTCCCTGGCTAGCATT
TTCGAGATAGACTGGCAGCCGTAGAAGCTTTCTAGACCAT
BS19567.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30053-RA | 1008 | CG30053-PA | 1..1008 | 17..1024 | 5025 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30053-RA | 1088 | CG30053-RA | 17..1027 | 15..1025 | 5040 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12688794..12689439 | 1025..380 | 3230 | 100 | Minus |
| 2R | 25286936 | 2R | 12689495..12689860 | 380..15 | 1815 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:42:33 has no hits.
BS19567.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:52 Download gff for
BS19567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30053-RA | 19..1026 | 17..1024 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:42:31 Download gff for
BS19567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30053-RA | 19..1026 | 17..1024 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:59 Download gff for
BS19567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30053-RA | 19..1026 | 17..1024 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:59 Download gff for
BS19567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12688795..12689438 | 381..1024 | 100 | <- | Minus |
| 2R | 12689495..12689858 | 17..380 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:42:31 Download gff for
BS19567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8576300..8576943 | 381..1024 | 100 | <- | Minus |
| arm_2R | 8577000..8577363 | 17..380 | 99 | | Minus |
BS19567.pep Sequence
Translation from 16 to 1023
> BS19567.pep
MAEELKVFFEECRGQGFSAKEMLAVCQPLIWRIRLARIKKWFFILLPLMV
IYLLWLCSDTFSWWLSALGRLVLIQILPLWDWRPYYHAKCLIPRDQSVQE
QAPSLGKAETLRQNCDLCEGLEGIGTVSNVSYSSLESEHLERGQPVIITD
TGLQTDVFSLLEQIEKKSPQWLTSEPCDVSSNLLLRKLFNLEAALDKIHS
WQGQTSNSWHLQLRNCQKKAVKSSRLFLDRPYYYPLHLAPYYSSWLLAVH
QQKRNQADIYVRGLVLIQQLSGHFEMVLHPKKPCNKGICPSLRMRLNAGE
GLIFTTDIWSLSYGLEKPHGKLTSLASIFEIDWQP*
BS19567.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30053-PA | 335 | CG30053-PA | 1..335 | 1..335 | 1794 | 100 | Plus |
