BS19568.complete Sequence
893 bp assembled on 2011-01-27
GenBank Submission: KX804320
> BS19568.complete
GAAGTTATCAGTCGACATGCTAAAGAGACCTGCGTTAGTTTATCGGTGCC
TTCAGACTTCTGTTAAAAGGTCCTACCATCTAAATGCACATGAACATTTA
AGAAAAAAAGAAATTCTCAAGCCCGAAAGCCAGCCTAGTCAAAAGCATAA
GAAATTTGGAGACGGCTCCATTGGAGTGATTCATGTGATCAAGAACGAAT
ATTATGGGCTCCCCAATCCCATGCACCGAAAATTCCGGGAAGATCTGGAG
AAACACCAAGACCGGAGGAAGGAATCAAACCTTTCGTTAAAGGAAGAAAA
GCGTGAAGATCTTGAAAAGATGCTAAAGGAATGCCAGAAGCTTGTCAAAG
AAATCACCATGCAGGCTAATGATGGCGATGTTACGAAGATCTGCAAGGAA
CTAGCCCAAAAAGAAAAGATGGACAAGGAAAAAATAAAGAAAAAGTGCCG
AGAGCTGGCAGCAAGAGAAAAATGTGAAAAGGATAAGCTGAAAAAGAAGT
GCAAGAAGTTGCTCAAGAAGGATAAGTGCAAGAAAAAAGATACTTGCGAA
GAAGAGAAGCCTTGTGAAGAAGAAGATCCTTGCGAGAAAAAAAGCTGTTG
CCCCAAAGATCCTTGCGCTAAAAAACCCAAGAAAGTTGACCCCTGCAAAA
AGAAAGATCCTTGCAAAAAAGAGGATCCATGCAAAAAGAAGGCTGTAAAT
TGGAAGAAAAAGTGCAAGGAGGTTGCGGAGAGGGAGCAATGCAAAAAGCT
GGCCGAGAAGAAGAAGTTTAAGAAAATGATAAAAATATGCAAAAACCTTG
CGGCGAAGGAAAAATGCAAAAAAATGGCCGAAAAAGAGATGTGCAGGAAA
AAGGCCAAAAAGGGGAAAAAGAAGTAAAAGCTTTCTAGACCAT
BS19568.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| djl-RA | 861 | CG1984-PA | 1..861 | 17..877 | 4305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| djl-RA | 1098 | CG1984-RA | 125..986 | 17..878 | 4310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7061038..7061807 | 109..878 | 3850 | 100 | Plus |
| 3R | 32079331 | 3R | 7060891..7060984 | 17..110 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:42:59 has no hits.
BS19568.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:52 Download gff for
BS19568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| djl-RA | 125..983 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:42:41 Download gff for
BS19568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| djl-RA | 125..983 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:06 Download gff for
BS19568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| djl-RA | 125..983 | 17..875 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:06 Download gff for
BS19568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7060891..7060984 | 17..110 | 100 | -> | Plus |
| 3R | 7061040..7061804 | 111..875 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:42:41 Download gff for
BS19568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2886613..2886706 | 17..110 | 100 | -> | Plus |
| arm_3R | 2886762..2887526 | 111..875 | 100 | | Plus |
BS19568.pep Sequence
Translation from 16 to 876
> BS19568.pep
MLKRPALVYRCLQTSVKRSYHLNAHEHLRKKEILKPESQPSQKHKKFGDG
SIGVIHVIKNEYYGLPNPMHRKFREDLEKHQDRRKESNLSLKEEKREDLE
KMLKECQKLVKEITMQANDGDVTKICKELAQKEKMDKEKIKKKCRELAAR
EKCEKDKLKKKCKKLLKKDKCKKKDTCEEEKPCEEEDPCEKKSCCPKDPC
AKKPKKVDPCKKKDPCKKEDPCKKKAVNWKKKCKEVAEREQCKKLAEKKK
FKKMIKICKNLAAKEKCKKMAEKEMCRKKAKKGKKK*
BS19568.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| djl-PA | 286 | CG1984-PA | 1..286 | 1..286 | 1546 | 100 | Plus |
| dj-PA | 248 | CG1980-PA | 1..248 | 1..279 | 626 | 48 | Plus |
| dj-PB | 218 | CG1980-PB | 12..218 | 46..279 | 575 | 51.1 | Plus |
| dj-PC | 187 | CG1980-PC | 1..187 | 69..279 | 563 | 52.8 | Plus |
| CG6209-PA | 607 | CG6209-PA | 183..506 | 7..281 | 290 | 29.3 | Plus |
