Clone BS19572 Report

Search the DGRC for BS19572

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:195
Well:72
Vector:pDNR-Dual
Associated Gene/TranscriptCG15337-RA
Protein status:BS19572.pep: full length peptide match
Sequenced Size:1250

Clone Sequence Records

BS19572.complete Sequence

1250 bp assembled on 2011-01-27

GenBank Submission: KX801593

> BS19572.complete
GAAGTTATCAGTCGACATGGACACAACAATGCCGATGGGCATGGTGCCCA
ACAGTCTCAATCCGATCCTCAATCCTCGACCCCTGCCGATACCCGTTACC
AAGCCCAGAACCAAACTCCAGCCGGATGAGCCACACGATGGCGTTTTAGC
GTTTAACAAGGGAAAAGTACCTCCGCCGGTATCCTCACGTCCTATTCCGC
TCCAGCGTGCAATGTCTGAGGTTCGGGACGCGCTGCGAGCTCAGCCTCAG
GCCAGTGACATTCGCCTGTTGATCTTCACGGCGGCGGCCAGCAGTGTGGA
GCACGAGAGAACTCTCATTCCGGTGCCGCCACAATTTCAAGCGGCACCAG
GCTCCGGCTGCCAAGTGGATCGATTGCGTCACGCCGTCGCCGATAATTGG
CCCTCCTGTCGCATCATGTTGGACTGCCCCAGTACTGACGAGCAGTATGC
CGCTTTGATGCCGGACGATGTGGACGCCCTGCATTTGCTGCACTGGATCC
TGGTGGCCACGCCCTCGTCGCCCACTCTGCGCCGCATGTCGGGATTGCAT
TTGCGGCGACTTTGCCGCTTTCTGGGCCTGGCACGACCCACCTTGGAGCC
CGGCCATCTGCTGAGCATCAGTTATGAGCGGAATGTTCAGCGGCTGGGCG
ATTCGAGTCCAAGGCCAAGATCCAGTTACGCCTATCTGGGCTTGCCCTTT
CAGTACCTATATCGTTTCCTGGCCACTGGACGTCTGGAGCAACCGCCAGG
TGTTGCCATTCGTTTGTATGCCCAACCGGAAACAGCCTTGGTTCACTGCG
ACGAGCTGAGCTCGCTGCCGCAGCAGCAGCATGTCCAGTCGGAGGAGCAA
TCGTCCAGCCAATCCATTGCAGAGAGGGAGCAGTCTGGAAATTCAAGCTC
GCTGTGCTGGCGGAACTCCACGCTCACTGCACCGCAAAGGGCACTGGTCA
TATGCGAACTACCCTCGGAGTTGGACGAATCCATTGCCCATTCGCCGGAG
AAGCATTTTCTCGAGTACTTTGTGCAGGAATCGCTGTCACTGCGACCCTG
CTATCTGCTCCTCTTCGACGAGGCGGTGGCCTCCAACATAATGTTCGTCT
GGCCGGGCAAATGTATTGAGCTGGAGCATCCGGGTCCTTCGATGGTCCAG
AGATCGCGTATCAGGATCATGAATATCGTCCGGAATCTGAGCAACCGGTT
GGGAGCAGTTAGGCGGGCTTTAGCCGCCATTTAGAAGCTTTCTAGACCAT

BS19572.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15337-RA 1218 CG15337-PA 1..1218 17..1234 6090 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG15337-RA 1430 CG15337-RA 57..1278 14..1235 6110 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8160322..8161400 157..1235 5395 100 Plus
X 23542271 X 8160110..8160252 14..156 715 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:41:16 has no hits.

BS19572.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:49 Download gff for BS19572.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1218 17..1234 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:56 Download gff for BS19572.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 60..1277 17..1234 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:30 Download gff for BS19572.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 60..1277 17..1234 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:30 Download gff for BS19572.complete
Subject Subject Range Query Range Percent Splice Strand
X 8160113..8160252 17..156 100 -> Plus
X 8160322..8161399 157..1234 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:56 Download gff for BS19572.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8054146..8054285 17..156 100 -> Plus
arm_X 8054355..8055432 157..1234 100   Plus

BS19572.pep Sequence

Translation from 16 to 1233

> BS19572.pep
MDTTMPMGMVPNSLNPILNPRPLPIPVTKPRTKLQPDEPHDGVLAFNKGK
VPPPVSSRPIPLQRAMSEVRDALRAQPQASDIRLLIFTAAASSVEHERTL
IPVPPQFQAAPGSGCQVDRLRHAVADNWPSCRIMLDCPSTDEQYAALMPD
DVDALHLLHWILVATPSSPTLRRMSGLHLRRLCRFLGLARPTLEPGHLLS
ISYERNVQRLGDSSPRPRSSYAYLGLPFQYLYRFLATGRLEQPPGVAIRL
YAQPETALVHCDELSSLPQQQHVQSEEQSSSQSIAEREQSGNSSSLCWRN
STLTAPQRALVICELPSELDESIAHSPEKHFLEYFVQESLSLRPCYLLLF
DEAVASNIMFVWPGKCIELEHPGPSMVQRSRIRIMNIVRNLSNRLGAVRR
ALAAI*

BS19572.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15337-PA 405 CG15337-PA 1..405 1..405 2110 100 Plus