BS19575.complete Sequence
1496 bp assembled on 2011-01-27
GenBank Submission: KX802703
> BS19575.complete
GAAGTTATCAGTCGACATGGCCGTTGTTTGGGACATGAGTCAATGGACGC
AGGCGTGGCGGATCGACAGTCTGCATCCGACGGTCCGCTCGAGCGGTACA
AGAACCACAACGAGCGGTACAATCATGTACGGTCGCACGTCGGTCGGTGC
AAATCAATCCGTGACGAATGGCAACTCAAATAGTGGCGCAAATAGCGGCG
GTGGTGCCAGTGGTGGTGCCCAGGGACACGATAAACTGAAAATTGGCTTC
TGCACGGACCTGGATAAATCGGTTTTGGTCAACAATTTCGAGAAACGTGG
CTGGCATCAGGTGAATGGCGATGATGATTGGCATTTCTATTGGGCCGGAG
TGCAAACCTGCCGGAATATATTCAGTGTGGATAGTGGTTATAGGATGCAC
GATAACCAGATGATCAATCATTTTCCCAATCACTATGAATTATCACGCAA
GGATTTACTGGTCAAGAACATCAAGCGTTATCGCAAGGATCTCGAGAGGG
ATGGCAATCCATTGGCGGAGAAAACAGAGTCCAATAACTCCAGTGGCACC
AGATATCTTTATTTGGATTTTGTGCCAACAACTTTTGTCCTGCCAGCCGA
TTATAATATGTTCGTGGAGGAGTATCGCAAGTTTCCGCTGAGTACGTGGA
TTATGAAACCCTGTGGAAAATCCCAAGGAGCGGGTATATTCCTTATAAAC
AAACTATCCAAACTCAAGAAGTGGTCAAGAGAGGCCAAGGGTCCTTTTCA
TCCACAAATAGCCAAGGAATCGTATGTGATATCCAGATACATAGACAATC
CACTATTGATTGGTGGTAAAAAATTTGATCTTCGTCTATATGTTCTAGTC
GCTTCGTTCAGACCCCTGAAAGCTTATCTTTTTAAGCAGGGATTCTGCCG
TTTTTGTACTGTAAAATACGATACTAGTGTTACGGAACTGGATAATATGT
ACGTCCATCTGACAAATGTGAGTGTGCAGAAACATGGTGGCGAATACAAT
ACCCTACATGGTGGCAAGTGGTCTGTACAAAATCTGGCCCTCTATTTGGA
AGGAACTCGGGGAAAAGAGGTTACGGATCGTTTGTTTGGAGCCATATCCT
GGCTTATAGTACACTCCTTAAGAGCTGTGGCTCCTGTGATGGCCAGTGAT
AGGCATTGTTTTGAGTGTTATGGCTACGACATCATCATAGACAATGCCTT
GAAACCTTGGCTAGTGGAGGTGAATGCCTCACCGTCACTCACATCAACTA
CAGTAAACGACAGGATACTAAAATACAAACTGATTGACAACATACTGTCC
GTGGTCCTACCCCCCGATGGAGTGCCCGATGTGCGTTGGAATAAGGTTCC
CAGTGCCGATGCTTTGGGCAACTTTGAGCTGCTCATCGATGAGGAGTTGG
CCGCCCAGGATGAACAACACCAAAATAGCAGCAGCAACACTCATAGTAAA
ACATCCAAAATGGGCAGCCGATGGAAGTGAAAGCTTTCTAGACCAT
BS19575.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32238-RA | 1464 | CG32238-PA | 1..1464 | 17..1480 | 7320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32238-RA | 2030 | CG32238-RA | 395..1860 | 15..1480 | 7330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4648670..4650135 | 15..1480 | 7330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:43:33 has no hits.
BS19575.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:54 Download gff for
BS19575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32238-RA | 397..1859 | 17..1479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:42:57 Download gff for
BS19575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32238-RA | 397..1859 | 17..1479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:18 Download gff for
BS19575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32238-RA | 397..1859 | 17..1479 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:18 Download gff for
BS19575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4648672..4650134 | 17..1479 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:42:57 Download gff for
BS19575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4648672..4650134 | 17..1479 | 100 | | Plus |
BS19575.pep Sequence
Translation from 16 to 1479
> BS19575.pep
MAVVWDMSQWTQAWRIDSLHPTVRSSGTRTTTSGTIMYGRTSVGANQSVT
NGNSNSGANSGGGASGGAQGHDKLKIGFCTDLDKSVLVNNFEKRGWHQVN
GDDDWHFYWAGVQTCRNIFSVDSGYRMHDNQMINHFPNHYELSRKDLLVK
NIKRYRKDLERDGNPLAEKTESNNSSGTRYLYLDFVPTTFVLPADYNMFV
EEYRKFPLSTWIMKPCGKSQGAGIFLINKLSKLKKWSREAKGPFHPQIAK
ESYVISRYIDNPLLIGGKKFDLRLYVLVASFRPLKAYLFKQGFCRFCTVK
YDTSVTELDNMYVHLTNVSVQKHGGEYNTLHGGKWSVQNLALYLEGTRGK
EVTDRLFGAISWLIVHSLRAVAPVMASDRHCFECYGYDIIIDNALKPWLV
EVNASPSLTSTTVNDRILKYKLIDNILSVVLPPDGVPDVRWNKVPSADAL
GNFELLIDEELAAQDEQHQNSSSNTHSKTSKMGSRWK*
BS19575.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32238-PA | 487 | CG32238-PA | 1..487 | 1..487 | 2612 | 100 | Plus |
| CG8918-PA | 496 | CG8918-PA | 56..465 | 76..484 | 1290 | 59.8 | Plus |
| CG31108-PB | 917 | CG31108-PB | 213..556 | 73..440 | 449 | 33.2 | Plus |
| CG31108-PA | 917 | CG31108-PA | 213..556 | 73..440 | 449 | 33.2 | Plus |
| CG16833-PM | 827 | CG16833-PM | 344..655 | 95..431 | 439 | 32 | Plus |
