BS19581.complete Sequence
1747 bp assembled on 2011-02-17
GenBank Submission: KX802209
> BS19581.complete
GAAGTTATCAGTCGACATGGCTAAACGGGGAAAAAAGGGAGGCATACCGA
GGGCCGAAATGGTGCAAGTGGCTTCCGCGAATCGCGACGAAAACCAGGTG
ACAGAGTTGAAGAAGGCCGATTACTTGCCCTATCTGTTCAATCTGGTCAT
GCCGAAGATGTTCTTCAAGAGCCCCAACAGAATTGTGATGGCCCGCCTGT
ATCCCGATGTCCATAAGCACGATCAGCAGTCAGCCGAATATTTTGAGGGC
TTCCAGGCGCCCTGCTTCGATTTGCCGGCTTCCCTTTTCCCGGATAACGC
TCCGATAGATAAGATCGTCTTTATGCCCACGGTTATGTTGCCCATGGGCT
TCGAAGCCGGTGGGGTTTTTGGGCCGGGTGTACTTCCACGTGATTGCTAT
CCCGTTGATCTGATTAGGACGGAACATGAGGGCCCAATGCCGCCGCTGTT
CGTCGGTCTGCGCAGCATGAATATCAGCCTGGCGTCGATGATCGATAGTT
TCCTGGACATGTACGACAATCCGGAAGGAGAGGACGCATTCGTGTATGAG
ATGCATGCCACCGATCATCATTACGATGATGATATAACCGAGGAGCTAAT
GCTTCGCCCTGACTTCACCTTGTCGGTGGCCTACAGTTTGCCGGCAACAA
TGCGTCTACCGTCGCCCTATCCATATCCTTGTGTCCAGGCGCAGGACAAC
ATTTATACCCCGGATTTGTCCAAAGTCCTGATGCTTATGCCGCACCAGTT
GAACATTACGGTGTCCATTCTGTCCACCGTTAACAATCCGCATGTTCCAT
CTGTGGCATTCGCCACCATGTGTGATGAGGAGGAGTGCCCCACGTTCGAC
CTGCCCACCGATGTCTTTCCCATTTGTGAGGGCGTCAATCGTCCAATCTT
TCTGCCCAAGCGTTTCATGCCCAAGGGATTCGAAGCCTGCTGCGTCTTCA
AGCCGGGAAGTCTTTCGGAGCTGTGGTTCATTAAACGGATAGGTCGATTC
GGCACTCCGCAACAGCAGCACAACTGTACCATTACACCACCTCTGTTTGT
GGGCAAATACTCCCGCGATGGTGAGTGCACCGATATGATAGAGGAAATCA
GAATGAATTTTGACAAGAAAGCCCGCGAAAGTGCCAAGTCCATTGCAAGT
TTAACGCTTGAAACTCTCGGGGGGCTTAGTAGGCACATAACCTCCACCAA
GGGCTTCTTGGTAATGGAATCGGACAAACCGACGCCTCCAGCGGGTGCTT
ACAGTGTGGAAAGCTACGAAGAGGCCTCTGAAGATGGATGCATTGCGAAG
GTGACCAAGGAATGTGCCAGTAAAATCACAGATACTCGAGATGATGGAAT
AAATACAGCAGACTATCAGTCTCAATTTCCCGAACTGGAACCGGAACCGG
AACCTGAACCGGAGGATGAAGGCGAAGATGTGGCCAATAAGAAGAAATGC
CTCTCGTGCTTTAAGATTGATAGCGACATTGATGTTATGTCTCATGCCAT
TGCCGAATTGACCGTCGCCGAATTGAGTATGCTGGGCGAGGAGAACCCAG
TGCCCGGGGTCGATACCGAACTCGCCTTGGACCAGCTGCGCGAGGTCTTA
GAGAATCGCGGCGAGATTCGATCCAACACCGACGACTTGATGCGGGATCA
CATATACAGGATGGAGCGTGATCTCATGCTGGCTCTGCGTCAGCCAATCC
GCAAGTGCTGCGAATGCACAGTGAACTTCTAGAGCTTTCTAGACCAT
BS19581.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:59:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15332-RA | 1716 | CG15332-PA | 1..1716 | 17..1732 | 8580 | 100 | Plus |
| CG15333-RA | 1629 | CG15333-PA | 581..908 | 654..981 | 905 | 85.1 | Plus |
| CG15333-RA | 1629 | CG15333-PA | 40..391 | 107..464 | 540 | 77.4 | Plus |
| CG15333-RA | 1629 | CG15333-PA | 1113..1221 | 1195..1303 | 230 | 80.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:59:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15332-RA | 2003 | CG15332-RA | 196..1912 | 17..1733 | 8585 | 100 | Plus |
| CG15333-RA | 1823 | CG15333-RA | 662..989 | 654..981 | 905 | 85.1 | Plus |
| CG15333-RA | 1823 | CG15333-RA | 121..472 | 107..464 | 540 | 77.4 | Plus |
| CG15333-RA | 1823 | CG15333-RA | 1194..1302 | 1195..1303 | 230 | 80.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:59:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7953943..7955636 | 1733..40 | 8470 | 100 | Minus |
| X | 23542271 | X | 8020357..8020684 | 981..654 | 905 | 85.1 | Minus |
| X | 23542271 | X | 8020874..8021225 | 464..107 | 540 | 77.4 | Minus |
| X | 23542271 | X | 8020044..8020152 | 1303..1195 | 230 | 80.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:59:27 has no hits.
BS19581.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:42:13 Download gff for
BS19581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15332-RA | 196..1909 | 17..1730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:28:09 Download gff for
BS19581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15332-RA | 196..1909 | 17..1730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:08:49 Download gff for
BS19581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15332-RA | 196..1909 | 17..1730 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:08:49 Download gff for
BS19581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7953946..7955634 | 42..1730 | 100 | <- | Minus |
| X | 7955771..7955795 | 17..41 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:28:09 Download gff for
BS19581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7847979..7849667 | 42..1730 | 100 | <- | Minus |
| arm_X | 7849804..7849828 | 17..41 | 100 | | Minus |
BS19581.pep Sequence
Translation from 16 to 1731
> BS19581.pep
MAKRGKKGGIPRAEMVQVASANRDENQVTELKKADYLPYLFNLVMPKMFF
KSPNRIVMARLYPDVHKHDQQSAEYFEGFQAPCFDLPASLFPDNAPIDKI
VFMPTVMLPMGFEAGGVFGPGVLPRDCYPVDLIRTEHEGPMPPLFVGLRS
MNISLASMIDSFLDMYDNPEGEDAFVYEMHATDHHYDDDITEELMLRPDF
TLSVAYSLPATMRLPSPYPYPCVQAQDNIYTPDLSKVLMLMPHQLNITVS
ILSTVNNPHVPSVAFATMCDEEECPTFDLPTDVFPICEGVNRPIFLPKRF
MPKGFEACCVFKPGSLSELWFIKRIGRFGTPQQQHNCTITPPLFVGKYSR
DGECTDMIEEIRMNFDKKARESAKSIASLTLETLGGLSRHITSTKGFLVM
ESDKPTPPAGAYSVESYEEASEDGCIAKVTKECASKITDTRDDGINTADY
QSQFPELEPEPEPEPEDEGEDVANKKKCLSCFKIDSDIDVMSHAIAELTV
AELSMLGEENPVPGVDTELALDQLREVLENRGEIRSNTDDLMRDHIYRME
RDLMLALRQPIRKCCECTVNF*
BS19581.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:21:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15332-PA | 571 | CG15332-PA | 1..571 | 1..571 | 3039 | 100 | Plus |
| CG15333-PA | 542 | CG15333-PA | 3..538 | 20..570 | 1412 | 52.3 | Plus |
