BS19594.complete Sequence
347 bp assembled on 2011-01-27
GenBank Submission: KX805571
> BS19594.complete
GAAGTTATCAGTCGACATGGTGAACGTACCGAAACAACGCCGCACCTTCT
GCAAGAAGTGCAAGGTCCACAAGCTGCACAAGGTGACGCAGTACAAGAAG
TCCAAGGAGCGCAAGGGAGCTCAGGGCAGGCGTCGTTACGACAGGAAACA
GCAGGGTTTCGGAGGTCAGACCAAGCCCATCTTCAGGAAGAAGGCCAAGA
CCACCAAGAAGATTGTGCTGCGTATGGAGTGCACCGAGTGCAAATACCGC
AAGCAGACTCCCCTGAAGCGTTGCAAGCACTTCGAGCTGGGCGGTGACAA
GAAGCGCAAGGGACAGATGATCCAGTTCTAGAAGCTTTCTAGACCAT
BS19594.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL36A-RB | 315 | CG7424-PB | 1..315 | 17..331 | 1575 | 100 | Plus |
RpL36A-RA | 315 | CG7424-PA | 1..315 | 17..331 | 1575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL36A-RB | 514 | CG7424-RB | 85..399 | 17..331 | 1575 | 100 | Plus |
RpL36A-RA | 457 | CG7424-RA | 35..349 | 17..331 | 1575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8042439..8042614 | 194..19 | 880 | 100 | Minus |
2L | 23513712 | 2L | 8041988..8042127 | 331..192 | 700 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:46:34 has no hits.
BS19594.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:00 Download gff for
BS19594.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL36A-RA | 32..346 | 17..331 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:44:13 Download gff for
BS19594.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL36A-RA | 35..349 | 17..331 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:25 Download gff for
BS19594.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL36A-RA | 35..349 | 17..331 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:25 Download gff for
BS19594.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8041988..8042125 | 194..331 | 100 | <- | Minus |
2L | 8042440..8042615 | 17..193 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:44:13 Download gff for
BS19594.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8041988..8042125 | 194..331 | 100 | <- | Minus |
arm_2L | 8042440..8042615 | 17..193 | 99 | | Minus |
BS19594.pep Sequence
Translation from 16 to 330
> BS19594.pep
MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGG
QTKPIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQ
MIQF*
BS19594.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL36A-PB | 104 | CG7424-PB | 1..104 | 1..104 | 562 | 100 | Plus |
RpL36A-PA | 104 | CG7424-PA | 1..104 | 1..104 | 562 | 100 | Plus |