BS19610.complete Sequence
965 bp assembled on 2011-01-04
GenBank Submission: KX802772
> BS19610.complete
GAAGTTATCAGTCGACATGGCGGCCAAGAGCGATATGGATATTCTGGCCA
ACTCCATGTACGAGGACGATCCCAATGGCAACCTAGCGCCCGCCACCACC
AAGGATAAGGAATCAGTCAAGCCGGAGGAGCTGAAGGTCACCCCCGCTGG
CACCAAAGCAACATCCCCCCCCAACTCGGCGACCTTAGTTTCGACTTCTC
CGCGATGGGGTCCGCAGAATAAGGGCGCCCAGGAACTAGCCTTGTTGTAC
AGTCCAGGAAAACGTGCCCAGGAAATCATTTGCGTCTACACCTGCATTGG
CCTTATGATCATTAACCTAGCCCTGATTGTTAGACACTTGCGATTGGAGC
GGATTAGTGTCGCCTTTCTGTCCGCCCTGTGCGGCATTATAACGGCCGAC
TTTGCTTCCGGCTTGGTTCACTGGGCGGCAGACACCTGGGGATCGGTGGA
CATACCGATGATTGGAAAGAACTTCCTGCGACCCTTTCGCGAGCATCATC
TGGATCCCACATCCATAACGCGACACGATTTCATTGAGACAAATGGCGAC
AACTTTATGGTTGGCATACCAATTCTCGGCTACTTGGCCCACTATTTTTA
CATCAGGACGCCCAGCGAGATACAGCAACACTTCGGCTGGATAGCCTATG
TGTTCCTCTGCTCCATATTCGTGGCCATGACCAATCAGATACACAAGTGG
TCGCATACCTATTGGGGATTGCCGAGGTGGGTCCTGTTACTCCAGAGCTG
TCACATCATCCTGCCACGCAAGCATCATCGCATCCATCACGTGGCGCCAC
ATGAGACCTACTTTTGCATCACCACCGGGTGGCTTAACTGGCCACTGGAA
CGCATCAGATTCTGGTCAACATTCGAGCTCATCATCGAGCATTTTACGGG
CCTCAAGCCCCGCGATGACGACCTGAAGTGGGCCAAGAAACTCACATAGA
AGCTTTCTAGACCAT
BS19610.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Kua-RC | 933 | CG10723-PC | 1..933 | 17..949 | 4665 | 100 | Plus |
| Kua-RD | 933 | CG10723-PD | 1..933 | 17..949 | 4665 | 100 | Plus |
| Kua-RB | 933 | CG10723-PB | 1..933 | 17..949 | 4665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Kua-RC | 1859 | CG10723-RC | 594..1526 | 17..949 | 4665 | 100 | Plus |
| Kua-RD | 1897 | CG10723-RD | 106..1038 | 17..949 | 4665 | 100 | Plus |
| Kua-RB | 1648 | CG10723-RB | 383..1315 | 17..949 | 4665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20100947..20101188 | 17..258 | 1210 | 100 | Plus |
| 2L | 23513712 | 2L | 20101910..20102130 | 468..688 | 1105 | 100 | Plus |
| 2L | 23513712 | 2L | 20101628..20101842 | 255..469 | 1075 | 100 | Plus |
| 2L | 23513712 | 2L | 20102193..20102364 | 687..858 | 860 | 100 | Plus |
| 2L | 23513712 | 2L | 20102424..20102516 | 857..949 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:43:53 has no hits.
BS19610.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:25 Download gff for
BS19610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kua-RB | 87..1019 | 17..949 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:38 Download gff for
BS19610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kua-RB | 383..1315 | 17..949 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:02 Download gff for
BS19610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kua-RB | 383..1315 | 17..949 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:02 Download gff for
BS19610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20100947..20101187 | 17..257 | 100 | -> | Plus |
| 2L | 20101631..20101842 | 258..469 | 100 | -> | Plus |
| 2L | 20101912..20102130 | 470..688 | 100 | -> | Plus |
| 2L | 20102195..20102364 | 689..858 | 100 | -> | Plus |
| 2L | 20102426..20102516 | 859..949 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:38 Download gff for
BS19610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20100947..20101187 | 17..257 | 100 | -> | Plus |
| arm_2L | 20101631..20101842 | 258..469 | 100 | -> | Plus |
| arm_2L | 20101912..20102130 | 470..688 | 100 | -> | Plus |
| arm_2L | 20102195..20102364 | 689..858 | 100 | -> | Plus |
| arm_2L | 20102426..20102516 | 859..949 | 100 | | Plus |
BS19610.pep Sequence
Translation from 16 to 948
> BS19610.pep
MAAKSDMDILANSMYEDDPNGNLAPATTKDKESVKPEELKVTPAGTKATS
PPNSATLVSTSPRWGPQNKGAQELALLYSPGKRAQEIICVYTCIGLMIIN
LALIVRHLRLERISVAFLSALCGIITADFASGLVHWAADTWGSVDIPMIG
KNFLRPFREHHLDPTSITRHDFIETNGDNFMVGIPILGYLAHYFYIRTPS
EIQQHFGWIAYVFLCSIFVAMTNQIHKWSHTYWGLPRWVLLLQSCHIILP
RKHHRIHHVAPHETYFCITTGWLNWPLERIRFWSTFELIIEHFTGLKPRD
DDLKWAKKLT*
BS19610.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Kua-PC | 310 | CG10723-PC | 1..310 | 1..310 | 1687 | 100 | Plus |
| Kua-PD | 310 | CG10723-PD | 1..310 | 1..310 | 1687 | 100 | Plus |
| Kua-PB | 310 | CG10723-PB | 1..310 | 1..310 | 1687 | 100 | Plus |
| Kua-PA | 310 | CG10723-PA | 1..310 | 1..310 | 1687 | 100 | Plus |
