BS19611.complete Sequence
557 bp assembled on 2011-01-04
GenBank Submission: KX801964
> BS19611.complete
GAAGTTATCAGTCGACATGGACCAGGAAGGACCACGCAGCAGCGGAAAGG
AGCGAAACGGAAAGAGCCACATTAAAATGGCTTTGAATGGCTTTGGTCGG
CGTGTCAGTGCGTCTGTCCTTTTAATCGCCTTGTCGCTGCTCAGCGGAGC
GCTGATCCTGCCGCCGGCTGCGGCGCAGCGTGACGAGAACTATCCACCGC
CGGGCATCCTGAAAATGGCCAAGCCCTTCCACGACGCGTGTGTGGAGAAG
ACGGGCGTAACCGAGGCTGCCATCAAGGAGTTCAGCGATGGGGAGATTCA
CGAGGACGAGAAGCTCAAATGCTACATGAACTGCTTCTTCCACGAGATCG
AAGTGGTGGACGACAATGGGGACGTGCATCTGGAGAAGCTCTTCGCCACG
GTACCGCTCTCCATGCGCGACAAGCTGATGGAGATGTCCAAGGGCTGCGT
CCATCCGGAGGGCGATACGCTGTGCCACAAGGCCTGGTGGTTCCACCAGT
GCTGGAAAAAGGCCGATCCCAAGCACTACTTCTTGCCGTGAAAGCTTTCT
AGACCAT
BS19611.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83a-RC | 525 | CG11421-PC | 1..525 | 17..541 | 2625 | 100 | Plus |
Obp83a-RB | 465 | CG11421-PB | 1..465 | 77..541 | 2325 | 100 | Plus |
Obp83a-RA | 465 | CG11421-PA | 1..465 | 77..541 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83a-RC | 823 | CG11421-RC | 156..681 | 17..542 | 2630 | 100 | Plus |
Obp83a-RB | 885 | CG11421-RB | 218..743 | 17..542 | 2630 | 100 | Plus |
Obp83a-RA | 839 | CG11421-RA | 172..697 | 17..542 | 2630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5972370..5972627 | 523..266 | 1290 | 100 | Minus |
3R | 32079331 | 3R | 5973209..5973382 | 190..17 | 870 | 100 | Minus |
3R | 32079331 | 3R | 5976271..5976540 | 535..269 | 460 | 78.9 | Minus |
3R | 32079331 | 3R | 5973054..5973129 | 266..191 | 380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:03 has no hits.
BS19611.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:25 Download gff for
BS19611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pbprp3-RA | 172..695 | 17..540 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:40 Download gff for
BS19611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83a-RA | 172..695 | 17..540 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:06 Download gff for
BS19611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83a-RA | 172..695 | 17..540 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:06 Download gff for
BS19611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5972299..5972315 | 524..540 | 100 | <- | Minus |
3R | 5972370..5972626 | 267..523 | 100 | <- | Minus |
3R | 5973054..5973129 | 191..266 | 100 | <- | Minus |
3R | 5973209..5973382 | 17..190 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:40 Download gff for
BS19611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1798021..1798037 | 524..540 | 100 | <- | Minus |
arm_3R | 1798092..1798348 | 267..523 | 100 | <- | Minus |
arm_3R | 1798776..1798851 | 191..266 | 100 | <- | Minus |
arm_3R | 1798931..1799104 | 17..190 | 100 | | Minus |
BS19611.pep Sequence
Translation from 16 to 540
> BS19611.pep
MDQEGPRSSGKERNGKSHIKMALNGFGRRVSASVLLIALSLLSGALILPP
AAAQRDENYPPPGILKMAKPFHDACVEKTGVTEAAIKEFSDGEIHEDEKL
KCYMNCFFHEIEVVDDNGDVHLEKLFATVPLSMRDKLMEMSKGCVHPEGD
TLCHKAWWFHQCWKKADPKHYFLP*
BS19611.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83a-PC | 174 | CG11421-PC | 1..174 | 1..174 | 947 | 100 | Plus |
Obp83a-PB | 154 | CG11421-PB | 1..154 | 21..174 | 841 | 100 | Plus |
Obp83a-PA | 154 | CG11421-PA | 1..154 | 21..174 | 841 | 100 | Plus |
Obp83b-PA | 141 | CG11422-PA | 9..140 | 46..173 | 524 | 70.5 | Plus |