BS19642.complete Sequence
284 bp assembled on 2011-01-04
GenBank Submission: KX803788
> BS19642.complete
GAAGTTATCAGTCGACATGCGCTTATCCAAAATGCAAACTAATGATGATC
GTTCCGCCTACACTGCCTTAATTAAGTCTGAACAAGCTAGGATAGTTGAA
ATGGTGTTCAATTCGATGGTACCAGTCCCGTTGGACGAGAGGATTGCATC
GTTTTGGATACAAATGTTGCGCTTACAATCAATGCAAGCCATAGAAGCCT
ACTCTTCATACACTATGTTAATAAGCCATCTTATGATCAGTTGGTTTATC
TCAAATGCAAACTACTAAAAGCTTTCTAGACCAT
BS19642.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-26 15:44:23 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 15:44:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12411416..12411591 | 269..94 | 880 | 100 | Minus |
| X | 23542271 | X | 12411644..12411722 | 95..17 | 395 | 100 | Minus |
| X | 23542271 | X | 12411221..12411309 | 185..97 | 310 | 89.9 | Minus |
| X | 23542271 | X | 12411365..12411439 | 95..23 | 220 | 89.3 | Minus |
| X | 23542271 | X | 14406502..14406563 | 167..106 | 190 | 87.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:21 has no hits.
BS19642.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:27 Download gff for
BS19642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32652-RA | 292..541 | 17..266 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:45 Download gff for
BS19642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32652-RA | 292..541 | 17..266 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:13 Download gff for
BS19642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12411419..12411589 | 96..266 | 100 | <- | Minus |
| X | 12411644..12411722 | 17..95 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:13 Download gff for
BS19642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12411419..12411589 | 96..266 | 100 | <- | Minus |
| X | 12411644..12411722 | 17..95 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:45 Download gff for
BS19642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12305452..12305622 | 96..266 | 100 | <- | Minus |
| arm_X | 12305677..12305755 | 17..95 | 100 | | Minus |
BS19642.pep Sequence
Translation from 16 to 267
> BS19642.pep
MRLSKMQTNDDRSAYTALIKSEQARIVEMVFNSMVPVPLDERIASFWIQM
LRLQSMQAIEAYSSYTMLISHLMISWFISNANY*
Sequence BS19642.pep has no blast hits.
