BS19665.complete Sequence
1001 bp assembled on 2011-01-04
GenBank Submission: KX800670
> BS19665.complete
GAAGTTATCAGTCGACATGAATTTATCCATCCGCGCTATTTCGGCCATCT
GCGGCGTTTTCTTGGGCTGCTGCAGTGGCGTCGTCTTCTTGGAGCTCCTG
GTTAAACTGGATCCCGGCGCTGGAAACCTTATAACTGGCGCCCAGTTTGC
ATTTATTGCCCTCGAGGGCTTCATCTTCACCTCGAAGTTTGGCCTGGCCC
AGAGAGTGATCAGCCTGCGCGACTATGCGCTCCTCGTGGCCATGTTTTTC
CTGACCAGCGTATGCAACAACTACGTGTTCAAGTTCAAAGTTCCAATGAC
ACTGCACATGATCATACGCGGCGGTTCGCTGATCTCCAACATGTGCCTGT
GCACGTTGATCCTGAAGAGGAGTTACCGGTTGAGTCAGTACATATCGGTG
CTCATGATCAGCGTGGGCATTTTCGTCTGCACATATTTCTCCAGTCCGGA
TTTGGTGGGTAAGATGGAGAATTTGGATAGTGGCGCCGAGGCGGATACGT
TCTGGTGGCTGTTGGGCGTGGCACTCTTGGTGCTGGCTCTATTTGTTTCC
TCCTACATGGGAATTACACAGGAGTTGCTGTATCGACGTCATGGCAAGTG
CGCCAGGGAAGCGTTGTATTACACCCACCTGTTGCCGCTGCCCGCCTTCC
TGCTCATGCATGACGACATACGGACGCACTGGCTTTTGGCGTTCACGGGC
GAGTCCTACCAGTTGCCCCTCCTGGGCGTGGCAGTGCCCCTAATCCTGCT
ATACTTATTGGGCAACGTGCTTGCGCAGCATTTGTGCATCAGCTCCGTTT
ACACCCTGACCACGGAGTGCAGCTCGCTGACGGTGACTCTGATCCTCACA
CTCCGCAAGTTCATCTCGCTGGTCTTTTCGATCGTATACTTCCGAAATCC
CTTCACCTGGTGGCACTGGCTGGGCACCGCGCTAGTCTTTGTGGGCACCT
TGATGTTTGCAAATGTGATCAGAGTTCCGAAATGAAAGCTTTCTAGACCA
T
BS19665.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14511-RA | 969 | CG14511-PA | 1..969 | 17..985 | 4845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14511-RA | 1216 | CG14511-RA | 92..1063 | 16..987 | 4860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29145831..29146802 | 987..16 | 4860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:43:22 has no hits.
BS19665.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:01 Download gff for
BS19665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14511-RA | 93..1060 | 17..984 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:33 Download gff for
BS19665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14511-RA | 93..1060 | 17..984 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:54 Download gff for
BS19665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14511-RA | 93..1060 | 17..984 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:54 Download gff for
BS19665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29145834..29146801 | 17..984 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:33 Download gff for
BS19665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24971556..24972523 | 17..984 | 100 | | Minus |
BS19665.pep Sequence
Translation from 16 to 984
> BS19665.pep
MNLSIRAISAICGVFLGCCSGVVFLELLVKLDPGAGNLITGAQFAFIALE
GFIFTSKFGLAQRVISLRDYALLVAMFFLTSVCNNYVFKFKVPMTLHMII
RGGSLISNMCLCTLILKRSYRLSQYISVLMISVGIFVCTYFSSPDLVGKM
ENLDSGAEADTFWWLLGVALLVLALFVSSYMGITQELLYRRHGKCAREAL
YYTHLLPLPAFLLMHDDIRTHWLLAFTGESYQLPLLGVAVPLILLYLLGN
VLAQHLCISSVYTLTTECSSLTVTLILTLRKFISLVFSIVYFRNPFTWWH
WLGTALVFVGTLMFANVIRVPK*
BS19665.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:47:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14511-PA | 322 | CG14511-PA | 1..322 | 1..322 | 1660 | 100 | Plus |
| Efr-PB | 352 | CG3774-PB | 1..325 | 1..318 | 936 | 54.9 | Plus |
| Efr-PA | 352 | CG3774-PA | 1..325 | 1..318 | 936 | 54.9 | Plus |
