BS19670.complete Sequence
1127 bp assembled on 2011-01-04
GenBank Submission: KX806225
> BS19670.complete
GAAGTTATCAGTCGACATGGGAGACCTTTTATTGAACACACCGAAAAGAA
AGCAACTGCTCAAGGATGGTCCACCCGTACCCACTAGGTGTCAGGTACTC
GGACGTGGAGCCTACGGCACCGTTTTCAAAGCTATTTACAGAGATCGCTC
CGTTGCTGTTAAGATAATTCGAGCCCAGGCAGCCTCAACTTTGCACAATG
AGTCTCATTTGCTGAATCTGGAGCACAGGAACATTGTACGCCTTCTTAAG
CTGGAGTCTGCGGCAGATTTCGGCTTGGTCATCATGGAATGTCCGAGGGG
ACAAAGTCTGCAGAGGATCGTTGACACTTTGGCTCTACCACTGATGCACA
GGGTCTTAATAACTCTGGATGTGGTTGCTGCTCTGAGATACTGCCATTCC
CAAAACGTATTACATCTGGATGTAAAGCCAACCAATATATTGGTTGCCCT
GGGAACAAAGTCTTCCATAACTTGCAATTCCTCGAAGATCAAAGTGAAGC
GAAGCTACATCTGCAAGCTCTGTGATTTCGGCTCCTCCATCGAGATGGGC
GAATTTTGTGCTTGGCAGGAGCCAAGCGTGGCCAAAGGAACCCTGAGATA
CATGTCTCCAGAAGCTCTGCGATCGGATACCCTTACCGAAGCCTCCGATA
TTTACTCCCTGGGCATTACAATGTGGCAACTGCAAGCGCGTAGATTGCCC
TATCACACACTCGATTGCAATGAGACCATAGCCTACCAGGTGGTCAAGCA
CGAACTGCGTCCGGACAACTATCATCAACTAAAGATTCTGGCTTTAGACT
CGCCCATTGACTGCGATTGGGATTTGGCCCATGAAAGCACCGCCAACGTG
ATCTGCAGAAGGGCAAATACCTCGGCGCGCCGTAATCTAAGCCTCGATCC
ATCTTACACCGTCGGCCGTGATCTGAAAAAGAAGCGCCACCGGAACCGAT
TAGCACTCCACTTTGATAGTCCGGCGCCGGAGGGCAGTGCGTGCTCGGAA
AGCGCTTACTCCCAATTATACAAGAGCTGTTGGGTCAGCGCCCCGGAATT
ACGATTGAGTTCTATCCAGCTGAAGCATGAGCTGGAATTCATTCTCTGTC
ATAGCACCTAGAAGCTTTCTAGACCAT
BS19670.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mos-RA | 1095 | CG8767-PA | 1..1095 | 17..1111 | 5475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mos-RA | 1340 | CG8767-RA | 35..1129 | 17..1111 | 5475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12751694..12752447 | 1111..358 | 3770 | 100 | Minus |
| 2R | 25286936 | 2R | 12752507..12752722 | 357..142 | 1080 | 100 | Minus |
| 2R | 25286936 | 2R | 12752776..12752902 | 143..17 | 635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:43:38 has no hits.
BS19670.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:24 Download gff for
BS19670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mos-RA | 35..1129 | 17..1111 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:37 Download gff for
BS19670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mos-RA | 35..1129 | 17..1111 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:59 Download gff for
BS19670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mos-RA | 35..1129 | 17..1111 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:59 Download gff for
BS19670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12751694..12752447 | 358..1111 | 100 | <- | Minus |
| 2R | 12752507..12752720 | 144..357 | 100 | <- | Minus |
| 2R | 12752776..12752902 | 17..143 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:37 Download gff for
BS19670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8639199..8639952 | 358..1111 | 100 | <- | Minus |
| arm_2R | 8640012..8640225 | 144..357 | 100 | <- | Minus |
| arm_2R | 8640281..8640407 | 17..143 | 100 | | Minus |
BS19670.pep Sequence
Translation from 16 to 1110
> BS19670.pep
MGDLLLNTPKRKQLLKDGPPVPTRCQVLGRGAYGTVFKAIYRDRSVAVKI
IRAQAASTLHNESHLLNLEHRNIVRLLKLESAADFGLVIMECPRGQSLQR
IVDTLALPLMHRVLITLDVVAALRYCHSQNVLHLDVKPTNILVALGTKSS
ITCNSSKIKVKRSYICKLCDFGSSIEMGEFCAWQEPSVAKGTLRYMSPEA
LRSDTLTEASDIYSLGITMWQLQARRLPYHTLDCNETIAYQVVKHELRPD
NYHQLKILALDSPIDCDWDLAHESTANVICRRANTSARRNLSLDPSYTVG
RDLKKKRHRNRLALHFDSPAPEGSACSESAYSQLYKSCWVSAPELRLSSI
QLKHELEFILCHST*
BS19670.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mos-PA | 364 | CG8767-PA | 1..364 | 1..364 | 1895 | 100 | Plus |
| Takl1-PA | 393 | CG31421-PA | 17..220 | 28..244 | 231 | 29.6 | Plus |
| wnd-PD | 950 | CG8789-PD | 135..328 | 23..238 | 228 | 28.9 | Plus |
| wnd-PC | 977 | CG8789-PC | 162..355 | 23..238 | 228 | 28.9 | Plus |
| wnd-PB | 977 | CG8789-PB | 162..355 | 23..238 | 228 | 28.9 | Plus |
