BS19691.complete Sequence
920 bp assembled on 2011-01-04
GenBank Submission: KX801954
> BS19691.complete
GAAGTTATCAGTCGACATGCGCAACGCCCATCCACAGCTGGAGCAACTGC
AGCAGGAGCTGCGCGACCTAATCTGCGAGCTGTGCAACCGGCAGTACAGC
ACAAAGAATGCCTTGGGCGAGCATTTAAAGCGTCATGCCCAGCGCAAGGA
GCACGTGTGCGAGCACTGTGGAGTGGCCAAGGTGACCCGAACGGAGCTAC
TGACCCACCTGCGCACCCACAATCCCACCTGGGAGCGCTTCAAGTGCGAG
CAGTGTCCGCAGCTCTTTCGCCACAAGAGCGCCATTAGCCGGCATGTTCG
GGTGGTCCACGAGGGTCAGCGGCGGTTCCAGTGCGGTCATTGCGAGAAAA
AGTTTGGCACGCATGCCTCGCAGGTGCGGCACGAGCGGCTGCACACGGAA
TCCACGGGCTCGGGAGAGGCAGCCGAGGAATGGCCCTTTGCCTGTATTCA
CTGCCAGAAGCCTTGCGTTTCGCGACAAACCCTTGAGTTGCACCTACGAA
GGCACCGCGCGAGAAAGACGCACAGAAAACGAAGGGAGCACAGTCGGGAG
AGTCAGGAGCAGGAGCAGGAGCACGACCGCGATCAGGAGCAGGGCGCTCG
GGAAGCTCAACAGGATCAGCTCCGCAAGGGGGAAAAGCTACGGCAGAGAG
ATCTCTCCAGGGAAAGCCACCGAAATGAGGTGACCATGCAGACAAGCCAG
CGGCCAAATGAGTGTCAACAAGGTCAAGAGTCCTACGATCCGGAACCGGA
TCCGCTGGAGGCAAGTCAGTGCAAGCTAGAGCAGGAAGATGCACTCGATC
CGGAATGGCAGCACAAAATAGAGCAGGACGCAGAATCGCAAGACTCGGCG
CGACTGGAAGGGCATTTCCATGACTACAAACCTATCCCTTCGAAAGCCTT
ATGAAAGCTTTCTAGACCAT
BS19691.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1529-RD | 1539 | CG1529-PD | 650..1539 | 15..904 | 4450 | 100 | Plus |
| CG1529-RC | 1539 | CG1529-PC | 650..1539 | 15..904 | 4450 | 100 | Plus |
| CG1529-RA | 888 | CG1529-PA | 1..888 | 17..904 | 4440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1529-RD | 3235 | CG1529-RD | 741..1630 | 15..904 | 4450 | 100 | Plus |
| CG1529-RC | 1815 | CG1529-RC | 741..1630 | 15..904 | 4450 | 100 | Plus |
| CG1529-RA | 3246 | CG1529-RA | 752..1641 | 15..904 | 4450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21030257..21031146 | 904..15 | 4450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:26 has no hits.
BS19691.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:27 Download gff for
BS19691.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RB | 755..1641 | 17..903 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:46 Download gff for
BS19691.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RA | 754..1640 | 17..903 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:14 Download gff for
BS19691.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RA | 754..1640 | 17..903 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:14 Download gff for
BS19691.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21030258..21031144 | 17..903 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:46 Download gff for
BS19691.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20901285..20902171 | 17..903 | 100 | | Minus |
BS19691.pep Sequence
Translation from 16 to 903
> BS19691.pep
MRNAHPQLEQLQQELRDLICELCNRQYSTKNALGEHLKRHAQRKEHVCEH
CGVAKVTRTELLTHLRTHNPTWERFKCEQCPQLFRHKSAISRHVRVVHEG
QRRFQCGHCEKKFGTHASQVRHERLHTESTGSGEAAEEWPFACIHCQKPC
VSRQTLELHLRRHRARKTHRKRREHSRESQEQEQEHDRDQEQGAREAQQD
QLRKGEKLRQRDLSRESHRNEVTMQTSQRPNECQQGQESYDPEPDPLEAS
QCKLEQEDALDPEWQHKIEQDAESQDSARLEGHFHDYKPIPSKAL*
BS19691.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1529-PA | 295 | CG1529-PA | 1..295 | 1..295 | 1611 | 100 | Plus |
| CG1529-PD | 512 | CG1529-PD | 218..512 | 1..295 | 1611 | 100 | Plus |
| CG1529-PC | 512 | CG1529-PC | 218..512 | 1..295 | 1611 | 100 | Plus |
| D19A-PA | 845 | CG10269-PA | 406..542 | 20..166 | 282 | 41.9 | Plus |
| D19B-PA | 774 | CG10270-PA | 378..514 | 20..166 | 268 | 39.2 | Plus |
