BS19692.complete Sequence
1442 bp assembled on 2011-01-04
GenBank Submission: KX803081
> BS19692.complete
GAAGTTATCAGTCGACATGCTGCACTCACAGACAATGCAATCCATACCCA
CTCTGCACCAGCCGCTACACTCCAAGGTATCGAACTATCTAAACAATCAG
CGAAGAACCGGACAATTCTGTGACCTGCTCCTCGAACTGGATTCGGATGA
TTCCCTCAGCTTAAGCGTCCATTTCTGCGTACTGGCTGCTCAGAGCCAGT
TTATAAACTCTAACCAGAAGCAACAGCAGTTCTCCATTCACAATCCGCTG
AAGATCACCATCCGTAATTTCAGCTGCACCCAATGCCTGCACACAATTGT
GGACTTCTTCTACGAGGATTTGGTGTCCGTGTCCAAGGAGCACGAACTGC
ATTTTAGGGAGCTAGCGCAAATTTTGGCTGTGACAGAACTACTGAATCTC
TACCAGTTGCAGCCCTTGGGCGAGGCGAAGGAAGCAACGGAGATCCCAGC
ACCTGGAGAGGCGCAACCAAATCCAGATCCAGAAAAGAAAGCGGAGGCTG
TGTTTGAGAATCGACAAAGTTACTTCAAGCTTAAGAACCCGCGAGCTGTA
AAGTCCAGCAGCAAAGTGAACTACTGCATTGGCTGCGACTTCAAGTGCTA
TCAGGTGCAGAAAATGATCGAGCACATGGGCAGCTGTGAGCCCTCCCATT
TGATCTGCTCGCTGTGCGAAGTCGGCTTTCTGGACTGGCGGGAATACGAC
ACTCACCTACGACGGCACTCTGGTGATCTTCGTAAGCCCTTCTTTTGCTT
GCAGTGCGGCATCCGCTTCAACACACGAGCTGCCCTGCTCGTCCATCAGC
CTAAGCATTCCACGGAAACGCCGCACATATGTCCACATTGCGGCAAGGGC
TTCAAGTGGAAGCAGGGCCTGAGCAATCACATCCTGGTCCACAATCCCGA
GAAGCAAATGCTCTGCGACGTCTGCGGATATAGCACCACGCACATGAAGG
CCCTCAAGTCACACAAACTGCTTCACACCGGAGAATTCTTTGCGTGCACA
GTTTCGGGCTGCAAGCATCGAGCCAATCGCAAGGAGAACCTCAAATTGCA
CATTGAAACTCACAAACAGGGTCGCGATTTTATCTGCGAGGTCTGTGGCT
GCAAGTTCAGCCAGAGCAAAAACCTCAAGCGTCACGCCCTCAAGCACACG
GAGAATGGTCCGAACCGCTACAAGTGCCAGCTGTGTGGATTCAGCAGTCA
TCGCTCCGACAAAATGAAGGAGCACGTGCAGCGGGTTCACACAGAGAAAC
CGGTGCAGTTGGAGCTCTCGGAAACGGTGGACAGTAGCTTTCCCGATGAC
TTTGAGCTTCCCGTGATCGAAACGTCACCCAAGAAGAAGCCAAAGAGTGT
TAAGAGCAAGACTATAAGGAATGTTAATCCTGACAAGCGACTGAAAACAC
TACTGCCCAAGGAGACTGTAGAATAGAAGCTTTCTAGACCAT
BS19692.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Plzf-RB | 1410 | CG6792-PB | 1..1410 | 17..1426 | 6945 | 99.5 | Plus |
| Plzf-RA | 1410 | CG6792-PA | 1..1410 | 17..1426 | 6945 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Plzf-RB | 2152 | CG6792-RB | 58..1467 | 17..1426 | 6945 | 99.5 | Plus |
| Plzf-RA | 2006 | CG6792-RA | 58..1467 | 17..1426 | 6945 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12047396..12048299 | 1426..523 | 4400 | 99.1 | Minus |
| 2L | 23513712 | 2L | 12048349..12048861 | 529..17 | 2565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:35 has no hits.
BS19692.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:28 Download gff for
BS19692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6792-RA | 58..1467 | 17..1426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:48 Download gff for
BS19692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Plzf-RA | 58..1467 | 17..1426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:20 Download gff for
BS19692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Plzf-RA | 58..1467 | 17..1426 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:20 Download gff for
BS19692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12047396..12048292 | 530..1426 | 99 | <- | Minus |
| 2L | 12048349..12048861 | 17..529 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:48 Download gff for
BS19692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12047396..12048292 | 530..1426 | 99 | <- | Minus |
| arm_2L | 12048349..12048861 | 17..529 | 100 | | Minus |
BS19692.pep Sequence
Translation from 16 to 1425
> BS19692.pep
MLHSQTMQSIPTLHQPLHSKVSNYLNNQRRTGQFCDLLLELDSDDSLSLS
VHFCVLAAQSQFINSNQKQQQFSIHNPLKITIRNFSCTQCLHTIVDFFYE
DLVSVSKEHELHFRELAQILAVTELLNLYQLQPLGEAKEATEIPAPGEAQ
PNPDPEKKAEAVFENRQSYFKLKNPRAVKSSSKVNYCIGCDFKCYQVQKM
IEHMGSCEPSHLICSLCEVGFLDWREYDTHLRRHSGDLRKPFFCLQCGIR
FNTRAALLVHQPKHSTETPHICPHCGKGFKWKQGLSNHILVHNPEKQMLC
DVCGYSTTHMKALKSHKLLHTGEFFACTVSGCKHRANRKENLKLHIETHK
QGRDFICEVCGCKFSQSKNLKRHALKHTENGPNRYKCQLCGFSSHRSDKM
KEHVQRVHTEKPVQLELSETVDSSFPDDFELPVIETSPKKKPKSVKSKTI
RNVNPDKRLKTLLPKETVE*
BS19692.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Plzf-PB | 469 | CG6792-PB | 1..469 | 1..469 | 2537 | 100 | Plus |
| Plzf-PA | 469 | CG6792-PA | 1..469 | 1..469 | 2537 | 100 | Plus |
| crol-PB | 891 | CG14938-PB | 279..472 | 214..412 | 294 | 34 | Plus |
| crol-PI | 962 | CG14938-PI | 279..472 | 214..412 | 294 | 34 | Plus |
| crol-PE | 962 | CG14938-PE | 279..472 | 214..412 | 294 | 34 | Plus |
| crol-PB | 891 | CG14938-PB | 307..500 | 214..412 | 280 | 31.5 | Plus |
| crol-PI | 962 | CG14938-PI | 307..500 | 214..412 | 280 | 31.5 | Plus |
| crol-PB | 891 | CG14938-PB | 345..552 | 193..409 | 272 | 32.7 | Plus |
| crol-PI | 962 | CG14938-PI | 345..552 | 193..409 | 272 | 32.7 | Plus |
| crol-PB | 891 | CG14938-PB | 232..436 | 195..404 | 262 | 28.9 | Plus |
| crol-PI | 962 | CG14938-PI | 232..436 | 195..404 | 262 | 28.9 | Plus |
| crol-PB | 891 | CG14938-PB | 447..666 | 190..410 | 259 | 29.5 | Plus |
| crol-PI | 962 | CG14938-PI | 447..666 | 190..410 | 259 | 29.5 | Plus |
| crol-PI | 962 | CG14938-PI | 502..727 | 183..410 | 231 | 29.4 | Plus |
| crol-PB | 891 | CG14938-PB | 223..393 | 244..417 | 226 | 31.4 | Plus |
| crol-PI | 962 | CG14938-PI | 223..393 | 244..417 | 226 | 31.4 | Plus |
| crol-PB | 891 | CG14938-PB | 221..365 | 270..417 | 202 | 29.5 | Plus |
| crol-PI | 962 | CG14938-PI | 221..365 | 270..417 | 202 | 29.5 | Plus |
