BS19711.complete Sequence
476 bp assembled on 2011-01-04
GenBank Submission: KX804216
> BS19711.complete
GAAGTTATCAGTCGACATGATTGGAGTCTCGGGAACTTTCAAGGTGCTGG
CGGCCATATCGGGTATACTCTTCATGGGCTATTGCGTATATTTCGACAAA
CAGCGTCGGAGTGATCCAGATTTCAAGAGGAAGTTGCACGAGCGCAGGAT
TCAACGCTCATTGGCATCCGTGAAGTCCACGGCATCGGTTTCCATGAGCG
AGCGGGACGTCGAAGTGTACTTCATGACCCAGATACACAAGGGCGAGACC
CTGATCACAAACGGCGATGTTGAGGCCGGCGTGGAGCATCTAATCAACGC
GATACTCGTCTGCGGCCAGCCGTCAAAACTGTTGCAGTTGCTCCAGAGCA
CCTTGCCCATGGATATTTTCACCACAATGCTGATCAAGATGCACGCCTAC
GAGGCCTCGCAGCGCTGTTTGCCTGTTTTAGTGGATGATGAGGCTACCAG
TAGCCTTTGAAAGCTTTCTAGACCAT
BS19711.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tomboy20-RA | 444 | CG14690-PA | 1..444 | 17..460 | 2220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tomboy20-RA | 681 | CG14690-RA | 106..551 | 17..462 | 2230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10735407..10735852 | 462..17 | 2230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:54 has no hits.
BS19711.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:29 Download gff for
BS19711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tomboy20-RA | 106..548 | 17..459 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:52 Download gff for
BS19711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tomboy20-RA | 106..548 | 17..459 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:25 Download gff for
BS19711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tomboy20-RA | 106..548 | 17..459 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:25 Download gff for
BS19711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10735410..10735852 | 17..459 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:52 Download gff for
BS19711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6561132..6561574 | 17..459 | 100 | | Minus |
BS19711.pep Sequence
Translation from 16 to 459
> BS19711.pep
MIGVSGTFKVLAAISGILFMGYCVYFDKQRRSDPDFKRKLHERRIQRSLA
SVKSTASVSMSERDVEVYFMTQIHKGETLITNGDVEAGVEHLINAILVCG
QPSKLLQLLQSTLPMDIFTTMLIKMHAYEASQRCLPVLVDDEATSSL*
BS19711.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tomboy20-PA | 147 | CG14690-PA | 1..147 | 1..147 | 738 | 100 | Plus |
Tom20-PB | 171 | CG7654-PB | 11..130 | 10..128 | 328 | 47.5 | Plus |
Tom20-PA | 171 | CG7654-PA | 11..130 | 10..128 | 328 | 47.5 | Plus |