BS19712.complete Sequence
500 bp assembled on 2011-01-04
GenBank Submission: KX800426
> BS19712.complete
GAAGTTATCAGTCGACATGTCCTTTGTGTTGCAATTGGCCACCAGGACAG
TACGAAGTACCATTGCTCAGGTGCGTGGCGTAGCCACCACAATGCCAAGG
CAAATTAAAGAGATTCATGAGAAGCAGGAGAACAGTGTAAAGATCTTCGA
GGGCGTTAATGTGGAATCGCCGCGTGCTCACCTGATGCTTAAATCCGCCT
GCCAGACCAAGTTTTGCCCGGAATGCACCTTGGGCCTGGACATCAAGCAC
ACGGATGTGCTAATCCTGTCGCAGTATGTCCGTTCCGACGGCTGTATGCT
GCCCAGAAGGATCACCGGACTTTGCCACCGGCAACAAAAGAAGATGGGCA
CTCTGGTAACCATGGCTCAGAAGGCGGGACTGATGCCAAATCTGGCGCCC
GAGTGGAGTAAAAGAGATCCCAAGAAGCGCTTCGGCTGGCGCAAGTTCAA
CAAGTACTTCCTGGAGTCCACAATTAAATACTAGAAGCTTTCTAGACCAT
BS19712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS18A-RA | 468 | CG31450-PA | 1..468 | 17..484 | 2325 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS18A-RA | 581 | CG31450-RA | 84..553 | 15..484 | 2335 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8561945..8562315 | 484..114 | 1855 | 100 | Minus |
3R | 32079331 | 3R | 8562412..8562510 | 113..15 | 480 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:08 has no hits.
BS19712.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:29 Download gff for
BS19712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS18A-RA | 76..543 | 17..484 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:54 Download gff for
BS19712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS18A-RA | 86..553 | 17..484 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:30 Download gff for
BS19712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS18A-RA | 86..553 | 17..484 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:30 Download gff for
BS19712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8561945..8562315 | 114..484 | 100 | <- | Minus |
3R | 8562412..8562508 | 17..113 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:54 Download gff for
BS19712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4387667..4388037 | 114..484 | 100 | <- | Minus |
arm_3R | 4388134..4388230 | 17..113 | 98 | | Minus |
BS19712.pep Sequence
Translation from 16 to 483
> BS19712.pep
MSFVLQLATRTVRSTIAQVRGVATTMPRQIKEIHEKQENSVKIFEGVNVE
SPRAHLMLKSACQTKFCPECTLGLDIKHTDVLILSQYVRSDGCMLPRRIT
GLCHRQQKKMGTLVTMAQKAGLMPNLAPEWSKRDPKKRFGWRKFNKYFLE
STIKY*
BS19712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS18A-PA | 155 | CG31450-PA | 1..155 | 1..155 | 812 | 100 | Plus |