BS19714.complete Sequence
569 bp assembled on 2011-01-04
GenBank Submission: KX803879
> BS19714.complete
GAAGTTATCAGTCGACATGCGATACATAAAGTCGGAGCCGTACTATGAAG
GGCTTCCTCCATTCAATGTCAGCGGCAGCCCGTTCAATGTGGTTCCCATT
CACAACTACCCGGAGCTTATGAAAGACACTTGCGCCCTAATCAACGCAGA
GTGGCCACGATCGGAAACGGCGCGCATGCGCTCCCTGGAGGCCTCCTGTG
ACAGCCTACCCTGCAGCCTGGTGCTGACCACCGAGGGAATGTGCCGCGTG
ATCGCTCACCTCAAGCTCAGCCCGATCAATTCCAAGAAGAAGGCCTGCTT
CGTCGAGTCCGTGGTGGTGGACAAGCGGCACCGTGGCCAGGGATTCGGCA
AGCTGATCATGAAGTTCGCCGAGGACTATTGCCGCGTCGTGCTGGACCTC
AAGACCATATATCTGTCCACCATCGACCAGGATGGATTCTACGAACGCAT
TGGCTACGAGTACTGCGCTCCCATTACAATGTATGGGCCGCGCCACTGTG
AGCTGCCCAGCTTGCAAAATGCCAAAAAGAAATACATGAAGAAGGTCTTA
TAGAAGCTTTCTAGACCAT
BS19714.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-RB | 537 | CG8481-PB | 1..537 | 17..553 | 2685 | 100 | Plus |
| CG8481-RA | 507 | CG8481-PA | 4..507 | 50..553 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-RB | 1506 | CG8481-RB | 369..906 | 17..554 | 2690 | 100 | Plus |
| CG8481-RA | 1412 | CG8481-RA | 308..812 | 50..554 | 2525 | 100 | Plus |
| MED6-RB | 1758 | CG9473-RB | 1..62 | 111..50 | 310 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9768923..9769427 | 50..554 | 2525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:45:37 has no hits.
BS19714.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:31 Download gff for
BS19714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RB | 352..888 | 17..553 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:01 Download gff for
BS19714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RB | 369..905 | 17..553 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:40 Download gff for
BS19714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RB | 369..905 | 17..553 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:40 Download gff for
BS19714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9768806..9768838 | 17..49 | 100 | -> | Plus |
| 3R | 9768923..9769426 | 50..553 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:01 Download gff for
BS19714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5594528..5594560 | 17..49 | 100 | -> | Plus |
| arm_3R | 5594645..5595148 | 50..553 | 100 | | Plus |
BS19714.pep Sequence
Translation from 16 to 552
> BS19714.pep
MRYIKSEPYYEGLPPFNVSGSPFNVVPIHNYPELMKDTCALINAEWPRSE
TARMRSLEASCDSLPCSLVLTTEGMCRVIAHLKLSPINSKKKACFVESVV
VDKRHRGQGFGKLIMKFAEDYCRVVLDLKTIYLSTIDQDGFYERIGYEYC
APITMYGPRHCELPSLQNAKKKYMKKVL*
BS19714.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-PB | 178 | CG8481-PB | 1..178 | 1..178 | 954 | 100 | Plus |
| CG8481-PA | 168 | CG8481-PA | 2..168 | 12..178 | 893 | 100 | Plus |
