BS19715.complete Sequence
647 bp assembled on 2011-01-04
GenBank Submission: KX804591
> BS19715.complete
GAAGTTATCAGTCGACATGGATAGTAATGATTCAGGAACAGCAGATGCGA
ATTCTGCACGGCAGTCGCTTGCGTTGCGGCGGGAATTGCGCAGAAAGAAA
ATATTGGAAGCGTCCAAGGCACGACTGGACAAATTGAATAGCAGATCGAC
GTCGGCGTTTCAGAATGAAAACCTCGATGGTGAACCCTCAAATACGCAAT
ATTCCGATCCGGAGGTGGAGCCGGATATTCCAATAAGGCGTTCATTTCTG
CCAGAACAACCTGCGCCCCAAAGAACCACGTCACGAAATGCATTTCTTAA
GAGCAGAGTTCACATTATTTTGGCGGCTTGCTTTGGATTTCTTTTGGCTC
TTTACACGAACACCAGTGTTTTCATTCCCGTTCTGCTTTTTGTGATTGCA
GAGCTTGCATTTCTGCAGAATTACAAAGAAGACCATTTACCGGCCAGCAT
GGGACCCTTGTTACTTATGTTCATCAATCCGAATATTACCAGCAAAATTA
AGCAGTTTAGCAGTATATTTTTTATTCTTCAGTCATTGTTGGGTGATCTT
GCGATAACCGTTTGTGTTGTTTGTTCAGGAAGCATGCTCTTACTAAATTT
TAGACCCGAATATGCTACAATTGTTAAATAAAAGCTTTCTAGACCAT
BS19715.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)SH0834-RA | 615 | CG5385-PA | 1..615 | 17..631 | 3045 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)SH0834-RA | 936 | CG5385-RA | 42..658 | 17..633 | 3055 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10311328..10311785 | 633..176 | 2275 | 99.8 | Minus |
2L | 23513712 | 2L | 10311899..10312058 | 176..17 | 785 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:46 has no hits.
BS19715.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:32 Download gff for
BS19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5385-RA | 12..624 | 17..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:04 Download gff for
BS19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5385-RA | 42..654 | 17..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:43 Download gff for
BS19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)SH0834-RA | 42..654 | 17..629 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:43 Download gff for
BS19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10311332..10311784 | 177..629 | 99 | <- | Minus |
2L | 10311899..10312058 | 17..176 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:04 Download gff for
BS19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10311332..10311784 | 177..629 | 99 | <- | Minus |
arm_2L | 10311899..10312058 | 17..176 | 99 | | Minus |
BS19715.pep Sequence
Translation from 16 to 630
> BS19715.pep
MDSNDSGTADANSARQSLALRRELRRKKILEASKARLDKLNSRSTSAFQN
ENLDGEPSNTQYSDPEVEPDIPIRRSFLPEQPAPQRTTSRNAFLKSRVHI
ILAACFGFLLALYTNTSVFIPVLLFVIAELAFLQNYKEDHLPASMGPLLL
MFINPNITSKIKQFSSIFFILQSLLGDLAITVCVVCSGSMLLLNFRPEYA
TIVK*
BS19715.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)SH0834-PA | 204 | CG5385-PA | 1..204 | 1..204 | 1021 | 100 | Plus |