BS19719.complete Sequence
674 bp assembled on 2011-01-04
GenBank Submission: KX806113
> BS19719.complete
GAAGTTATCAGTCGACATGCATCATCACCAGAATCTCGGAGACGCGGCCG
CCATGAATGGAATGATCCCGCCATACGAAGCCATGGCTATGTACGAGCAG
CCCAAGCCCAGATTCATCTTCAAGATGCCCCGCGTGGTGCCTGACCAGAG
GTCCAAGTTCGATAGCGACGAGCTCTTCCGCCGATTGAGTAGGGAGAGCG
AGGTTCGCTACACAGGATACCGGGAACGTGCAATGGAGGAGCGCAGGATG
CGGTTTGTCAACGACTGCCGCAAGGGCTATGCGGAGATATCGATGGTAGC
TTCAGGAACTAATCTGCAGCTCTACTTCAACGCCAACCACAATCCGTACG
CCCAGGAGCAGGATTGCGATTTCGAGCGGGAGCGGGGCAAAGTTCATTTG
CGTTCTAGTTTCATCATGAACGGGGTGTGCGTCCGCTTCCGGGGCTGGGT
GGATCTGGACCGACTGGATGGCGCTGCCTGCCTGGAGTTCGATGAACAAC
GAGCCCAGCAGGAGGATGCTCAGCTGCAGGAGCAGATTCAAAGCTACAAC
CAGCGCATGGCTGAGTCCAGGAGAATCTACCACACGCCCCAGACTCCACC
CGAGGATCACCATCACAGAGGTGGGCCTGGTCTGCCTAGAGGACCAATGG
GATGGTAGAAGCTTTCTAGACCAT
BS19719.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bro-RA | 642 | CG7960-PA | 1..642 | 17..658 | 3210 | 100 | Plus |
| Bgb-RB | 762 | CG7959-PB | 53..518 | 90..555 | 425 | 72.7 | Plus |
| Bgb-RA | 642 | CG7959-PA | 53..518 | 90..555 | 425 | 72.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bro-RA | 744 | CG7960-RA | 34..678 | 14..658 | 3225 | 100 | Plus |
| Bgb-RB | 1242 | CG7959-RB | 337..802 | 90..555 | 425 | 72.7 | Plus |
| Bgb-RA | 1242 | CG7959-RA | 337..802 | 90..555 | 425 | 72.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1647902..1648546 | 14..658 | 3225 | 100 | Plus |
| 3L | 28110227 | 3L | 1640047..1640512 | 90..555 | 425 | 72.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:45:58 has no hits.
BS19719.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:32 Download gff for
BS19719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 37..678 | 17..658 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:06 Download gff for
BS19719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 37..678 | 17..658 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:47 Download gff for
BS19719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 37..678 | 17..658 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:47 Download gff for
BS19719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1647905..1648546 | 17..658 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:06 Download gff for
BS19719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1647905..1648546 | 17..658 | 100 | | Plus |
BS19719.pep Sequence
Translation from 16 to 657
> BS19719.pep
MHHHQNLGDAAAMNGMIPPYEAMAMYEQPKPRFIFKMPRVVPDQRSKFDS
DELFRRLSRESEVRYTGYRERAMEERRMRFVNDCRKGYAEISMVASGTNL
QLYFNANHNPYAQEQDCDFERERGKVHLRSSFIMNGVCVRFRGWVDLDRL
DGAACLEFDEQRAQQEDAQLQEQIQSYNQRMAESRRIYHTPQTPPEDHHH
RGGPGLPRGPMGW*
BS19719.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bro-PA | 213 | CG7960-PA | 1..213 | 1..213 | 1159 | 100 | Plus |
| Bgb-PA | 213 | CG7959-PA | 5..198 | 11..202 | 684 | 65.1 | Plus |
| Bgb-PB | 253 | CG7959-PB | 5..198 | 11..202 | 684 | 65.1 | Plus |
