BS19720.complete Sequence
713 bp assembled on 2011-01-04
GenBank Submission: KX804489
> BS19720.complete
GAAGTTATCAGTCGACATGGCGACAAGGTCTTGTGCGTACAAGGACTGTG
AATACTATTACGTAGGCCACGAAAACGCGCTGACCAAAGGAAGAACCCTG
TTTGCCTTTCCCAAACAACCGCAAAGGGCGAGAATCTGGCACGAAAACGG
CCAAGTGCATCCAAAGATTCCCCATAGCCAGCTTTTTATGTGCTCCCTTC
ACTTTGACCGCAAGTTCATATCCTCCTCTAAGAACCGAACGCTCCTCGTC
GGCGAGGCAGTGCCGTTTCCGTACGAGGAAAGCAGTAGCAAGCCGGAGGA
GGAGCCCCAACAAGTGGCTTCCACTTCGCATGAGAGCTACTATATAAACC
TGAGCGACGATGAGCTCAGCATCAACAATGTGGACACTACCTCAGTTACT
ACAATTGACGCAGTCCACGATAGTCCACCGCAGAAGCGCCCGAAGGAATC
TTCCATTGTCATTGCTCTAAAGGAAGCTGTGAAAATGGAACCCAATCCGA
ATGCAGGCCGAGTTAGAGCAGAACCCGACAATATAGATACTACTGAAGTG
TCTGTGTTCAACTTCAAGGGACAGGAGTACGTACAAATGTCTATGGAGTA
TTACTTGCAGGAAAAGCGGAAAATGGCTAAACTTTTGCAAGACTATAAAA
ATGCTTTAAGAAGCATTAAGAAACATATTTCCCACCTTGACCTTTAAAAG
CTTTCTAGACCAT
BS19720.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip2-RA | 681 | CG9771-PA | 1..681 | 17..697 | 3405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip2-RA | 903 | CG9771-RA | 88..768 | 17..697 | 3405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4645181..4645568 | 404..17 | 1940 | 100 | Minus |
| 3R | 32079331 | 3R | 4644784..4645076 | 697..405 | 1465 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:46:08 has no hits.
BS19720.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:33 Download gff for
BS19720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip2-RA | 27..705 | 17..695 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:07 Download gff for
BS19720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip2-RA | 88..766 | 17..695 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:51 Download gff for
BS19720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip2-RA | 88..766 | 17..695 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:51 Download gff for
BS19720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4645181..4645568 | 17..404 | 100 | | Minus |
| 3R | 4644786..4645076 | 405..695 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:07 Download gff for
BS19720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 470508..470798 | 405..695 | 100 | <- | Minus |
| arm_3R | 470903..471290 | 17..404 | 100 | | Minus |
BS19720.pep Sequence
Translation from 16 to 696
> BS19720.pep
MATRSCAYKDCEYYYVGHENALTKGRTLFAFPKQPQRARIWHENGQVHPK
IPHSQLFMCSLHFDRKFISSSKNRTLLVGEAVPFPYEESSSKPEEEPQQV
ASTSHESYYINLSDDELSINNVDTTSVTTIDAVHDSPPQKRPKESSIVIA
LKEAVKMEPNPNAGRVRAEPDNIDTTEVSVFNFKGQEYVQMSMEYYLQEK
RKMAKLLQDYKNALRSIKKHISHLDL*
BS19720.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip2-PA | 226 | CG9771-PA | 1..226 | 1..226 | 1185 | 100 | Plus |
