BS19726.complete Sequence
1787 bp assembled on 2011-01-28
GenBank Submission: KX802136
> BS19726.complete
GAAGTTATCAGTCGACATGGTTGTAGTGAAAATAGCTTTCATTTTGAGTG
TGGGCCTAGTAGGCATATTGGCCCATAAGCACCAGTCAAAGGAGCTGGAT
GCGAAATATAATTGGTGGCAGCACGAGGTCTTCTATCAGATCTATCCGAG
ATCCTTTCAGGACAGCAATGGTGATGGTATTGGTGATCTTCAAGGTATTA
CTTCTAGGCTACAGTACTTCAAGGATACGGGCATCACGTCCGTATGGTTG
AGTCCCATTTATGAGTCACCAATGGTAGACTTTGGATACGATATATCTAA
CTATACAAATATACAGCCGGAATATGGCACCCTTGAGGACTTTGACGCCT
TGATAGCCAAGGCCAATGAACTGGGCGTGAAAGTTATTTTGGACTTTGTT
CCCAATCACAGCTCAAATAAGCATCCCTGGTTCATAAAGTCAGTAGCCCG
AGAGCCAGGGTACGAGGATTTCTATGTGTGGGAGGATGGTATTCTCCTGG
AGAACGGAACTCGTGTGCCGCCCAACAATTGGCTGTCGGTGTTCTCCGGA
TCCGCTTGGATGTGGAACGATGAGAGGCAGCAGTACTATCTCAGGCAGTT
CACTTATGGACAACCCGATTTGAACTACCGAAATCCCGCCGTGATTAAGG
CCATGGATGATGTGATGCTCTTCTGGCTAAACAAGGGTATTGCCGGCTTC
CGCATCGATGCCATTATATATATTTACGAGGATGCTCAACTGAGGGATGA
GCCTCCGAGTGGCACTACCGATGATCCAAATAATGAGGCCTACTTGAGCC
ACATCTATACCAGAAATCAGCCTGAGGATTACGGTCTACTTCAGCATTGG
CGGCAACTTCTGGATAATTATACAGCTAACCACGATGGGCCATTGAGGAT
AATGATGACCGAGGGTTATGCTTCGGTGTCGCAACTAATGGAATACTATG
AAGATTCGAATGGTGTACAGGGCCCCCAGTTTCCCTTCAACTTTGACTTC
ATCACCGAACTGAATGCCAATTCGACAGCTGCGGACTTTGTCTTCTATAT
CTCCAGGTGGCTCATCTATATGCCACATGGTCATGTGGCCAACTGGGTGA
TGGGAAATCACGACAATCCTCGAGTGGCATCACGATTCGGTGAGAAATCT
GTGGACGCCATGAATATGCTGCTGATGACATTGCCAGGAATTGGTATTAC
TTATAATGGCGAGGAGTTGGGCATGACTGACTACAGGGACATCAGCTGGA
GCGATACGGTGGATCAGCCCGCTTGTGAGGCTGGAATCGACAACTACAAG
ACGATTTCTAGAGATCCTGAGCGAACTCCCATGCAATGGAGTAGTGATGT
GAATGCAGGATTCTCCTCCGCCGATCGCACTTGGTTGCCTGTCAATCCGA
ATTATAAGGAACTTAATCTTCGGAATCAGCAGCAGGCGAGGCGAAGTCAT
TACAAGATCTATCAGTCCCTTCTGAAGCTCAGACAACTGCCAGTTCTGAA
GAACGGATCCTTTGTTCCAGAAGTGGTTAATCGCAGGGTCTTCGCTTTCA
AGCGAGAACTGAAGAACGAGCACACTCTGCTGACCATTGTGAACGTGAGC
AACCGCACTGAACTGGTTGACATCGCGGACTTTATAGAACAGCCCAATCG
ATTGAGTGTCCTTGTGGCGGGAGTGGACTCGCAACACCGGGTGGGGGATC
GACTTAAGGCCGAGACAATTGAATTGGCGCCCAACGAGGGATTAGTTATT
CAGCTGAATAAGCGAAAGTAAAAGCTTTCTAGACCAT
BS19726.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:30:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mal-B1-RA | 1755 | CG14934-PA | 1..1755 | 17..1771 | 8775 | 100 | Plus |
| Mal-B2-RD | 1695 | CG14935-PD | 43..641 | 113..711 | 820 | 75.8 | Plus |
| Mal-B2-RC | 1695 | CG14935-PC | 43..641 | 113..711 | 820 | 75.8 | Plus |
| Mal-B2-RD | 1695 | CG14935-PD | 990..1198 | 1057..1265 | 280 | 75.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:30:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mal-B1-RA | 1814 | CG14934-RA | 6..1760 | 17..1771 | 8775 | 100 | Plus |
| Mal-B2-RD | 1927 | CG14935-RD | 148..746 | 113..711 | 820 | 75.8 | Plus |
| Mal-B2-RC | 2237 | CG14935-RC | 148..746 | 113..711 | 820 | 75.8 | Plus |
| Mal-B2-RD | 1927 | CG14935-RD | 1095..1303 | 1057..1265 | 280 | 75.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:30:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11847231..11848422 | 17..1208 | 5960 | 100 | Plus |
| 2L | 23513712 | 2L | 11848481..11848827 | 1208..1554 | 1735 | 100 | Plus |
| 2L | 23513712 | 2L | 11848898..11849115 | 1554..1771 | 1090 | 100 | Plus |
| 2L | 23513712 | 2L | 11850454..11851052 | 113..711 | 820 | 75.8 | Plus |
| 2L | 23513712 | 2L | 11851401..11851518 | 1057..1174 | 215 | 78.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:30:42 has no hits.
BS19726.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:41 Download gff for
BS19726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14934-RA | 6..1758 | 17..1769 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:00:31 Download gff for
BS19726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mal-B1-RA | 6..1758 | 17..1769 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:03:10 Download gff for
BS19726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mal-B1-RA | 6..1758 | 17..1769 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:03:10 Download gff for
BS19726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11847231..11848421 | 17..1207 | 100 | -> | Plus |
| 2L | 11848481..11848827 | 1208..1554 | 100 | -> | Plus |
| 2L | 11848899..11849113 | 1555..1769 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:00:31 Download gff for
BS19726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11847231..11848421 | 17..1207 | 100 | -> | Plus |
| arm_2L | 11848481..11848827 | 1208..1554 | 100 | -> | Plus |
| arm_2L | 11848899..11849113 | 1555..1769 | 100 | | Plus |
BS19726.pep Sequence
Translation from 16 to 1770
> BS19726.pep
MVVVKIAFILSVGLVGILAHKHQSKELDAKYNWWQHEVFYQIYPRSFQDS
NGDGIGDLQGITSRLQYFKDTGITSVWLSPIYESPMVDFGYDISNYTNIQ
PEYGTLEDFDALIAKANELGVKVILDFVPNHSSNKHPWFIKSVAREPGYE
DFYVWEDGILLENGTRVPPNNWLSVFSGSAWMWNDERQQYYLRQFTYGQP
DLNYRNPAVIKAMDDVMLFWLNKGIAGFRIDAIIYIYEDAQLRDEPPSGT
TDDPNNEAYLSHIYTRNQPEDYGLLQHWRQLLDNYTANHDGPLRIMMTEG
YASVSQLMEYYEDSNGVQGPQFPFNFDFITELNANSTAADFVFYISRWLI
YMPHGHVANWVMGNHDNPRVASRFGEKSVDAMNMLLMTLPGIGITYNGEE
LGMTDYRDISWSDTVDQPACEAGIDNYKTISRDPERTPMQWSSDVNAGFS
SADRTWLPVNPNYKELNLRNQQQARRSHYKIYQSLLKLRQLPVLKNGSFV
PEVVNRRVFAFKRELKNEHTLLTIVNVSNRTELVDIADFIEQPNRLSVLV
AGVDSQHRVGDRLKAETIELAPNEGLVIQLNKRK*
BS19726.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mal-B1-PA | 584 | CG14934-PA | 1..584 | 1..584 | 3127 | 100 | Plus |
| Mal-B2-PD | 564 | CG14935-PD | 14..563 | 32..580 | 1945 | 62.7 | Plus |
| Mal-B2-PC | 564 | CG14935-PC | 14..563 | 32..580 | 1945 | 62.7 | Plus |
| Mal-B2-PA | 564 | CG14935-PA | 14..563 | 32..580 | 1945 | 62.7 | Plus |
| Mal-A6-PC | 601 | CG30360-PC | 38..599 | 28..579 | 1449 | 49.1 | Plus |
