Clone BS19729 Report

Search the DGRC for BS19729

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:197
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG31950-RA
Protein status:BS19729.pep: full length peptide match
Sequenced Size:398

Clone Sequence Records

BS19729.complete Sequence

398 bp assembled on 2011-01-04

GenBank Submission: KX802062

> BS19729.complete
GAAGTTATCAGTCGACATGACAGAACTGAGCATCACTGGCCAACAGGTGA
TGCCTCCGCCCGCTTGTACACCCCCGGAGCCCTTCCGCATCACAACGAAC
GCCCCGCACCAGATGAACGATGCCAGTTTGACGCCGGGACGCAGGAAGCT
CCAGAAGTGGCTGGGTCGAGTTCTGCGGATCGTGATTACGGACGGACGCG
TGCTGGTGGGATTCTTCAACTGCACGGACCGCGACGCCAACATCGTGCTG
TCCATGTGCGCCGAGTACTTGGTGGAGGGCCAGGAGCCGCGCCTGCTGGG
CAACGTCATGGTTCCCGGCCAGCACATAGTCTCCCTAAGCATCGACGAGC
CGGATCCGCAGTCCAGCCTGCTGGTGCAATAGAAGCTTTCTAGACCAT

BS19729.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31950-RB 366 CG31950-PB 1..366 17..382 1740 98.4 Plus
CG31950-RA 366 CG31950-PA 1..366 17..382 1740 98.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31950-RB 658 CG31950-RB 249..615 16..382 1745 98.4 Plus
CG31950-RA 482 CG31950-RA 73..439 16..382 1745 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2878592..2878958 16..382 1745 98.4 Plus
Blast to na_te.dros performed on 2014-11-26 15:38:20 has no hits.

BS19729.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:37:28 Download gff for BS19729.complete
Subject Subject Range Query Range Percent Splice Strand
CG31950-RA 74..439 17..382 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:42 Download gff for BS19729.complete
Subject Subject Range Query Range Percent Splice Strand
CG31950-RA 74..439 17..382 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:22 Download gff for BS19729.complete
Subject Subject Range Query Range Percent Splice Strand
CG31950-RA 74..439 17..382 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:22 Download gff for BS19729.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2878593..2878958 17..382 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:42 Download gff for BS19729.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2878593..2878958 17..382 98   Plus

BS19729.pep Sequence

Translation from 16 to 381

> BS19729.pep
MTELSITGQQVMPPPACTPPEPFRITTNAPHQMNDASLTPGRRKLQKWLG
RVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEYLVEGQEPRLLGNVMVP
GQHIVSLSIDEPDPQSSLLVQ*

BS19729.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG31950-PB 121 CG31950-PB 1..121 1..121 634 100 Plus
CG31950-PA 121 CG31950-PA 1..121 1..121 634 100 Plus