BS19731.complete Sequence
431 bp assembled on 2011-01-04
GenBank Submission: KX800429
> BS19731.complete
GAAGTTATCAGTCGACATGACCAGCCTAACCGCAGTTTTCCAGATGGCGA
GGCAGCGATTGATAGCCCCAGCGATAGGAAACTGGGCACGTTTTTATGCT
GCAAAACCGGCGGCGCCAGCGGGCAAGAAGAAAAAGCTTGGCAAGCTGGG
TCCCATCATGGAGAAGAAAGTCATACCCGTGGAAACGGATGCCAACAAAT
TGGTGAACTATGTATGCGGAAGTAACTACATGAAAACAGGAGAAGATATC
AAAATTAAACCGGATTCGGAATACCCCGACTGGCTGTGGACGCTGAATAC
GGAAGGCATCGTTCCGCTGGACGAACTGGACCCCAACTCCAAGCAGTACT
GGCGCCGTCTGAGGAAACTGGCCTTGCGGCGCAACAATCAGCTGTCCAAG
CTAAAGAAGTTCTAGAAGCTTTCTAGACCAT
BS19731.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL54-RA | 399 | CG9353-PA | 1..399 | 17..415 | 1920 | 98.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL54-RA | 682 | CG9353-RA | 122..525 | 14..417 | 1945 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21061270..21061430 | 257..417 | 760 | 98.1 | Plus |
2R | 25286936 | 2R | 21061070..21061206 | 117..253 | 670 | 99.3 | Plus |
2R | 25286936 | 2R | 21060910..21061015 | 14..119 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:46:59 has no hits.
BS19731.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:43 Download gff for
BS19731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL54-RA | 135..533 | 17..415 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:18 Download gff for
BS19731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL54-RA | 125..523 | 17..415 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:10 Download gff for
BS19731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL54-RA | 125..523 | 17..415 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:10 Download gff for
BS19731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21060913..21061015 | 17..119 | 100 | -> | Plus |
2R | 21061073..21061206 | 120..253 | 99 | -> | Plus |
2R | 21061267..21061428 | 254..415 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:18 Download gff for
BS19731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16948418..16948520 | 17..119 | 100 | -> | Plus |
arm_2R | 16948578..16948711 | 120..253 | 99 | -> | Plus |
arm_2R | 16948772..16948933 | 254..415 | 97 | | Plus |
BS19731.pep Sequence
Translation from 16 to 414
> BS19731.pep
MTSLTAVFQMARQRLIAPAIGNWARFYAAKPAAPAGKKKKLGKLGPIMEK
KVIPVETDANKLVNYVCGSNYMKTGEDIKIKPDSEYPDWLWTLNTEGIVP
LDELDPNSKQYWRRLRKLALRRNNQLSKLKKF*
BS19731.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL54-PA | 132 | CG9353-PA | 1..132 | 1..132 | 696 | 100 | Plus |