BS19733.complete Sequence
695 bp assembled on 2011-01-04
GenBank Submission: KX801158
> BS19733.complete
GAAGTTATCAGTCGACATGTCAGATAAGATGAAAATGAGCCTTGACGACA
TTATCAAGATGAAATTTAATAAGAACAAGTTTGTTAATGCCAAAAATGAA
CGTGTTCAAGGAGGATCGATCAGAAAGCGAAATTCAGAAGGCGGACTTAG
AGGAATTCAAAGGTCCCGCAACGGAACTGGATTCATTCGGAAGAGCAAAT
TCAAACAGGAAACCCTTTTGAAGCCGCCAAAAAAACCGACTCTTGTCATG
GTTTGCAATTTGGATTACGGAGTGGATGATGACGACATCATGGAGCTTTT
CAATCAAGACGGCGTGGTGGAGAAAGGTTTTGTGCACTATGATCGCGATG
GTAACTCATTGGGCACCGCTCACTTGTCGTTCAAATATCGCGAAGAGGCC
TTCCAGATCATCGAGCAGTTCCACGGAGTCCGTTTGGATGGACGCCGATT
GAAATTACATCTCGTACAAAACACAAGAAATTTTAAACGCACTGATGTCG
ATGATCTTTCCTTGCGGATGGGTTCTTTCAAGACTCGTTTCTTGCAGAAT
GGTACTTTTAAGACTCGTTCCTTGCAGAATGGTTTTCAGAAGTCTCGTCT
TTTTCGCAATAGTTCCTTCAAGCCTCGTCCTTTCAAGAAACATAACTTTA
AGTCTCGAGCGTTCGATACTGATTTCTAAAAGCTTTCTAGACCAT
BS19733.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ref2-RC | 663 | CG17031-PC | 1..663 | 17..679 | 3315 | 100 | Plus |
| Ref2-RB | 663 | CG17031-PB | 1..663 | 17..679 | 3315 | 100 | Plus |
| Ref2-RA | 663 | CG17031-PA | 1..663 | 17..679 | 3315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ref2-RC | 1717 | CG17031-RC | 851..1515 | 15..679 | 3325 | 100 | Plus |
| Ref2-RB | 1511 | CG17031-RB | 645..1309 | 15..679 | 3325 | 100 | Plus |
| Ref2-RA | 911 | CG17031-RA | 45..709 | 15..679 | 3325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12610719..12611383 | 679..15 | 3325 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:47:07 has no hits.
BS19733.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:44 Download gff for
BS19733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ref2-RA | 22..682 | 17..677 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:20 Download gff for
BS19733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ref2-RA | 47..707 | 17..677 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:13 Download gff for
BS19733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ref2-RA | 47..707 | 17..677 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:13 Download gff for
BS19733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12610721..12611381 | 17..677 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:20 Download gff for
BS19733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12610721..12611381 | 17..677 | 100 | | Minus |
BS19733.pep Sequence
Translation from 16 to 678
> BS19733.pep
MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRS
RNGTGFIRKSKFKQETLLKPPKKPTLVMVCNLDYGVDDDDIMELFNQDGV
VEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLV
QNTRNFKRTDVDDLSLRMGSFKTRFLQNGTFKTRSLQNGFQKSRLFRNSS
FKPRPFKKHNFKSRAFDTDF*
BS19733.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ref2-PC | 220 | CG17031-PC | 1..220 | 1..220 | 1148 | 100 | Plus |
| Ref2-PB | 220 | CG17031-PB | 1..220 | 1..220 | 1148 | 100 | Plus |
| Ref2-PA | 220 | CG17031-PA | 1..220 | 1..220 | 1148 | 100 | Plus |
| Ref1-PA | 266 | CG1101-PA | 1..229 | 1..192 | 253 | 34.8 | Plus |
