BS19739.complete Sequence
524 bp assembled on 2011-01-04
GenBank Submission: KX803781
> BS19739.complete
GAAGTTATCAGTCGACATGTCGGACGGCATCGAGGTCGAGCAATTGGTGG
AGAGCAAGCCGAGAAGGATGCCGCTGGCCACGTCGCTGGAGAAGGACTCG
ATTCGCGAGGCCTACGAGGATGTACGCTCCGATCTGACAGACACCGAGTG
GGCGGTATTCAAGTTCGATGGCGCCCAGATTATTGTACATGCGCGCGGTC
AGTGCTTTGAGGAATTCCGACAGCAGTTCGGCGACTCGGAGCGCGCCTTT
GGCTACATACGCATCCAGATGGGTGACGAGATGTCCAAGCGCAAAAAGTT
CATCTTCCTGACGTGGATCGGGCAGGAGGTGGGCGTCATCCAGAGGGCCA
AGATGTCCACGGACAAGGCGCTGATCAAGGATGTCCTCAACAATTTTGCC
GTGGAACTTCAGGCGGGAGTGGAGGCCGAGCTGGACATTGAGCTCTTCCG
TGAAGCACTGAACCGTGCCGGCGGCGCCAACTACGGAACGGGCATCCGGG
ATAACTAAAAGCTTTCTAGACCAT
BS19739.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6891-RA | 492 | CG6891-PA | 1..492 | 17..508 | 2460 | 100 | Plus |
CG6891-RC | 441 | CG6891-PC | 1..441 | 68..508 | 2205 | 100 | Plus |
CG6891-RB | 441 | CG6891-PB | 1..441 | 68..508 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6891-RA | 994 | CG6891-RA | 351..843 | 16..508 | 2465 | 100 | Plus |
CG6891-RB | 805 | CG6891-RB | 210..654 | 64..508 | 2225 | 100 | Plus |
CG6891-RC | 950 | CG6891-RC | 359..799 | 68..508 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18780680..18781004 | 67..391 | 1625 | 100 | Plus |
X | 23542271 | X | 18785786..18785927 | 250..391 | 650 | 97.2 | Plus |
X | 23542271 | X | 18781078..18781194 | 392..508 | 585 | 100 | Plus |
X | 23542271 | X | 18786001..18786073 | 392..464 | 365 | 100 | Plus |
X | 23542271 | X | 18775578..18775629 | 16..67 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:47:48 has no hits.
BS19739.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:46 Download gff for
BS19739.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6891-RA | 350..839 | 17..506 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:27 Download gff for
BS19739.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6891-RA | 352..841 | 17..506 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:27 Download gff for
BS19739.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6891-RA | 352..841 | 17..506 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:27 Download gff for
BS19739.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18775579..18775629 | 17..67 | 100 | -> | Plus |
X | 18780681..18781004 | 68..391 | 100 | -> | Plus |
X | 18781078..18781192 | 392..506 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:27 Download gff for
BS19739.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18669612..18669662 | 17..67 | 100 | -> | Plus |
arm_X | 18674714..18675037 | 68..391 | 100 | -> | Plus |
arm_X | 18675111..18675225 | 392..506 | 100 | | Plus |
BS19739.pep Sequence
Translation from 16 to 507
> BS19739.pep
MSDGIEVEQLVESKPRRMPLATSLEKDSIREAYEDVRSDLTDTEWAVFKF
DGAQIIVHARGQCFEEFRQQFGDSERAFGYIRIQMGDEMSKRKKFIFLTW
IGQEVGVIQRAKMSTDKALIKDVLNNFAVELQAGVEAELDIELFREALNR
AGGANYGTGIRDN*
BS19739.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6891-PA | 163 | CG6891-PA | 1..163 | 1..163 | 829 | 100 | Plus |
CG6891-PC | 146 | CG6891-PC | 1..146 | 18..163 | 746 | 100 | Plus |
CG6891-PB | 146 | CG6891-PB | 1..146 | 18..163 | 746 | 100 | Plus |