BS19749.complete Sequence
869 bp assembled on 2011-01-04
GenBank Submission: KX804662
> BS19749.complete
GAAGTTATCAGTCGACATGCTGGGCAATCTGTGCCGGCTTGTGGGTGCCC
GTTCCCCGATCACCAGGCGCTTGCTGCACACGGAGCGGAAAGTTCGGGTG
AATGGCTCAGATTTGAACATTGTGGAGAGCGGCAGTGGGGAGCGGAGTCT
ACTCCTGATGCCGGGAGCACTGGGTTCCTCGTGGACCGACTTTAGGCCCC
AGATCGAGCAGCTGCCGAAACTGCTGCCGGGTCACACCATCATCGCCTGG
GATCCGCCGGGTTATGGCAAATCAGTGCCGCCGCAGCGCAAGTTCGGCCT
TGAATTCTTTCGGGAGGATGCCCAGGCAGCCGTGGATTTGATGCGTGCCC
TGGACAGACCACGCTTCTCCATTTTGGGCTGGAGCGATGGAGGCATCACG
GCGCTTATAGTCGCAGGTCGCCATGCGGAAGCTGTGGATCGCCTAGCAAT
CTGGGGAGCAGGTGCCTACTTGAACGCCGACGAAGTCAAGGCCCTTAAGA
ACATTCGGGATGTAGCCAAGTGGTCGCCGCGCATGCGTGAGCCCATGGAA
AAGGTTTACGGCGTCGAAAGATTCCCCCAATTGTGGGCCGAATGGGTGGA
CGCCGCATGCGCCTTCTATGACCAACGGGATGGAGACTTCTGTCGCACCG
AAGTTGAGAAAATAAAGATACCTACTTTTATACTCCACGGAAAGAAGGAT
CCCATGATAGCAGCGGAGCACATTCCTTGGCTGAGGGAGCGTTTGCCTCA
TGCGGAATATTATGAGTTCCCCGAGGGGAAGCATAATATCCATTTACGTT
ATGCGGAGGAGTTTAACAAACTGGTGGCCGATTTCTTTAACAAAAATAAC
TAGAAGCTTTCTAGACCAT
BS19749.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5377-RA | 837 | CG5377-PA | 1..837 | 17..853 | 4095 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5377-RA | 1253 | CG5377-RA | 176..1013 | 17..854 | 4100 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22467145..22467982 | 854..17 | 4100 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:48:31 has no hits.
BS19749.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:48 Download gff for
BS19749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5377-RA | 146..967 | 17..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:33 Download gff for
BS19749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5377-RA | 176..997 | 17..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:43 Download gff for
BS19749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5377-RA | 176..997 | 17..838 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:43 Download gff for
BS19749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22467161..22467982 | 17..838 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:33 Download gff for
BS19749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18292883..18293704 | 17..838 | 99 | | Minus |
BS19749.pep Sequence
Translation from 16 to 852
> BS19749.pep
MLGNLCRLVGARSPITRRLLHTERKVRVNGSDLNIVESGSGERSLLLMPG
ALGSSWTDFRPQIEQLPKLLPGHTIIAWDPPGYGKSVPPQRKFGLEFFRE
DAQAAVDLMRALDRPRFSILGWSDGGITALIVAGRHAEAVDRLAIWGAGA
YLNADEVKALKNIRDVAKWSPRMREPMEKVYGVERFPQLWAEWVDAACAF
YDQRDGDFCRTEVEKIKIPTFILHGKKDPMIAAEHIPWLRERLPHAEYYE
FPEGKHNIHLRYAEEFNKLVADFFNKNN*
BS19749.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5377-PA | 278 | CG5377-PA | 1..278 | 1..278 | 1489 | 100 | Plus |
