Clone BS19766 Report

Search the DGRC for BS19766

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:197
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG3817-RA
Protein status:BS19766.pep: gold
Sequenced Size:863

Clone Sequence Records

BS19766.complete Sequence

863 bp assembled on 2011-01-04

GenBank Submission: KX800372

> BS19766.complete
GAAGTTATCAGTCGACATGGCTCTTTTGACTGAGAAGCGTGTTAAAAAGA
CACATGCTCCTGCGAGCGACAGTTCTCCGGAGGAATCCGATTCCGAGGGC
AGCCAGAATTCAGCCAGCGAAGCGGAGGGCAACGCCGGCTGGGCGGATTC
CATTCAGAAGGTCCTGAAGACCACCAAGCCGAAGACCCAAAAAAAAACCG
TGCTAGCTCGAGCCAAAAAAAGCCAGGCGGCTGTGCGATTCCAGAAAGAC
GCCGCCAACAAAAAGCCAGGATTCGATTTCGAGATCGAGAAAGCAGATGT
CAAGGAGGAGGACGAAGGCGATAACCATGAAGACGAGAAGCCGCAGGCCT
CTGCCTTGGATGCCACGCTAACCAAACAGCAGCGTAAGAATGTGCCCCTC
CAGCTGCGTGTGAAGCCCAGTTTCCGGGACATGGAGCGTGAACGAACGCT
CCGCAAAGTTGCCACTCGTGGAGTGGTGCAGTTCTTTAATGCCGTGCGCA
TTCAGCAGAAGGATCTGCAGCAGCAGCTGGAGGAAGCGGGTCCGCTGGAC
AGCCGACAGGATGCGGTGCTAAACAACATCAACAAGCGAAAGTTTTTGGA
CGTCCTGATGAGCGGGAAGCGCGCCAAATCCACACCCGTAGATAACGCTG
TAAAGAAAGAGGAACAAGAAACGGATGACGACGACGAAGACAAGGGCTCC
AGCGGCAAAAAGAAGTCCGAATGGAGTGTGCTGCGCGAGGACTTCATGAC
CAACAAGAAGATCAAGCACTGGGACGAGGAAGACGACGACGAGGAGGGTC
ACAATGATGAAGCTGATGACAGCGATTACGATGATGGGGAAGAATAGAAG
CTTTCTAGACCAT

BS19766.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG3817-RA 831 CG3817-PA 1..831 17..847 4155 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG3817-RA 879 CG3817-RA 15..845 17..847 4155 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14898753..14899583 17..847 4155 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:49:22 has no hits.

BS19766.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:51 Download gff for BS19766.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 41..871 17..847 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:43 Download gff for BS19766.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 41..871 17..847 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:00 Download gff for BS19766.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 15..845 17..847 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:00 Download gff for BS19766.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14898753..14899583 17..847 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:43 Download gff for BS19766.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10724475..10725305 17..847 100   Plus

BS19766.pep Sequence

Translation from 16 to 846

> BS19766.pep
MALLTEKRVKKTHAPASDSSPEESDSEGSQNSASEAEGNAGWADSIQKVL
KTTKPKTQKKTVLARAKKSQAAVRFQKDAANKKPGFDFEIEKADVKEEDE
GDNHEDEKPQASALDATLTKQQRKNVPLQLRVKPSFRDMERERTLRKVAT
RGVVQFFNAVRIQQKDLQQQLEEAGPLDSRQDAVLNNINKRKFLDVLMSG
KRAKSTPVDNAVKKEEQETDDDDEDKGSSGKKKSEWSVLREDFMTNKKIK
HWDEEDDDEEGHNDEADDSDYDDGEE*

BS19766.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG3817-PA 276 CG3817-PA 1..276 1..276 1413 100 Plus