Clone BS19767 Report

Search the DGRC for BS19767

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:197
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG7857-RA
Protein status:BS19767.pep: full length peptide match
Sequenced Size:971

Clone Sequence Records

BS19767.complete Sequence

971 bp assembled on 2011-01-04

GenBank Submission: KX804699

> BS19767.complete
GAAGTTATCAGTCGACATGTGTGACGGCGATGTGGCAATTGCGGAGCTGG
AATCCCGTCTGGATGAGGTCAGTCTGGAGGACATAGGTGCCAGACATCGT
CGCGAGCGCAAGGATTTGCAGGCCAAGCTGCAGGCCATGAAGAAGAATGC
GCCGAAAAATAATAAAAACAAGCGGAAGGAGTTCCTGGAGGAGATGGCTC
GCCTGGAGGGAGAGCTGGAGCAGCGCCACAAGGCGGAACTGAAGGCAGCG
GAAGCCATGGAGGCACCGGTGTTGGTGGAACCGGTCGTCAAAGAGCCAGC
GGAAAAGCCAGAAACTGAAGTGACAGACGATGATGGAATCGAGGAAAAAG
AGGAACAGCTGGCGCCCAATCAGCGTGTTTCCAAGGCACAGAAACGCCGG
GACAAGAAGGCAAAGGAGGCACGTGCACGAGAGGCAGAGATCAAGACGGA
GCTGCAAAATGCTGCCAATCAGCCAACGCCCAAGTTAATCGAACTGCAGC
AGATTACAGCAAAGCTATCCCAACGCCAATTATCCCTTCACAATATACCC
TCCGATGGCGACTGCTTATATCAGTCCATCAGACACCAACTTATCGTAAA
TGCTCTTCCAGGTCACAGTGTTCAGGAGTTGCGGGAGGAAACTGCCAATT
ATGTGCGTGCTCACAAGGACTCGCTTATCTCATACATGATCCACCCGGAA
ACAGGAGACATTCTGAACGACCAACAATTCGAACAATACTGCCACGACAT
AGCAAAAACTCACGCTTGGGGTGGCCACATAGAACTGAAGGCCATCTCAT
CGCTACTCCGGGTGCCCATTGAAGTTATCCAAGCGGAAGGAGCACCGACG
CTCCTGGGGCAAGAGGAATTCGGTGGATCACCGCTGATCATCTGCTACCA
CCGCCACATATACCAATTGGGTGCCCACTACAATTCCACGGTGCCAGCAG
CCTAAAAGCTTTCTAGACCAT

BS19767.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG7857-RA 939 CG7857-PA 1..939 17..955 4695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7857-RA 1234 CG7857-RA 80..1021 15..956 4710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15504217..15504815 613..15 2995 100 Minus
3L 28110227 3L 15503813..15504159 956..610 1735 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:49:27 has no hits.

BS19767.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:52 Download gff for BS19767.complete
Subject Subject Range Query Range Percent Splice Strand
CG7857-RA 82..1018 17..953 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:46 Download gff for BS19767.complete
Subject Subject Range Query Range Percent Splice Strand
CG7857-RA 82..1018 17..953 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:02 Download gff for BS19767.complete
Subject Subject Range Query Range Percent Splice Strand
CG7857-RA 82..1018 17..953 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:02 Download gff for BS19767.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15503816..15504157 612..953 100 <- Minus
3L 15504219..15504813 17..611 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:46 Download gff for BS19767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15496916..15497257 612..953 100 <- Minus
arm_3L 15497319..15497913 17..611 100   Minus

BS19767.pep Sequence

Translation from 16 to 954

> BS19767.pep
MCDGDVAIAELESRLDEVSLEDIGARHRRERKDLQAKLQAMKKNAPKNNK
NKRKEFLEEMARLEGELEQRHKAELKAAEAMEAPVLVEPVVKEPAEKPET
EVTDDDGIEEKEEQLAPNQRVSKAQKRRDKKAKEARAREAEIKTELQNAA
NQPTPKLIELQQITAKLSQRQLSLHNIPSDGDCLYQSIRHQLIVNALPGH
SVQELREETANYVRAHKDSLISYMIHPETGDILNDQQFEQYCHDIAKTHA
WGGHIELKAISSLLRVPIEVIQAEGAPTLLGQEEFGGSPLIICYHRHIYQ
LGAHYNSTVPAA*

BS19767.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG7857-PA 312 CG7857-PA 1..312 1..312 1598 100 Plus