BS19770.complete Sequence
1076 bp assembled on 2011-01-04
GenBank Submission: KX805646
> BS19770.complete
GAAGTTATCAGTCGACATGGAGATTGACTTGGGATTTGCGGAAAAGAGCG
ACAATGGCGCCTGGCTGAGCAACCGCTACTTTCCCAGCAAGCTGGGTGGC
CAGCCCGCATGGCTGGAACTGGAGGCCTTGCCGCCCACGTCGCAGCTGCA
GTGCAGCAAGTGCAGGGCACCCAAATCCTTCCTGGCTCAGCTATACGCTC
CCTTCGAAGACGAGTACAACTTTCATCGGTCCATCTATGTGTTCCTGTGC
CGGAATTCCGACTGCCAGGAGGCCCAAAATGCAAGCAATTTCACAGTCCT
CAGGTCACAGTTGCCGCGAAAGAATAAGTTCTTTTCGGAGGAGGAGCCGA
GCGACGTGGGTCAACCCCTGCCCGCCGTTCCCTGCCTAAAGAAACTATGC
GCCGCCTGCGGTTGCCATGCTCCCCACGCCTGCAGCAAATGCAAGGCTAT
CCACTACTGCTCACCAGAGCATCAAAGGGCCCACTGGCCACAACACAAGC
CAAACTGCGGAGCACCAGAAGTAGCCACTGAGAAGCCCTTAACACAAATC
GTTTTCCCAGAATTTGAGATTGTAATGGACAGCAACCCCGTGGAGTCTGG
CGAGGAGGACAAGGACGATGAGGCTCGCTTGGCGGAGTTCCAGGAGCTGG
AGTCCAGCGGGAAGACGGGCGACTTGAGCAATGTTTCCGAGGCGGAAATG
GACAAGTACTTCGGAAACTCGGCGGCCGCCGATGACAAGACCTTTCGTCA
GTTCAAAAAGCAAACAGCAGCCGAACCCGATCAGATCGTGCGCTACAAAC
GTGGAGGCCAGCCCCTCTGGATCACGAATACCGTCAAAACGGTGGAGGAC
CAACTTAACAAGCTGCCCAATTGCATTGCTTGCGGAGGAGAGCGTCAGTT
CGAATTTCAGATTATGCCGCAAGCGCTGACTCTTCTGGAGGACGAAAACC
TCGACTGGGGCGTCCTGGCCGTCTACACCTGCGCCAAAAGCTGCCCCATC
GACGGCTACGTGGAGGAGCTTCTCATCAAGCAGGACATTGTGGCGGAGGA
TCAGAGTTGAAAGCTTTCTAGACCAT
BS19770.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zfrp8-RB | 1044 | CG3260-PB | 1..1044 | 17..1060 | 5130 | 99.4 | Plus |
| Zfrp8-RA | 1044 | CG3260-PA | 1..1044 | 17..1060 | 5130 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zfrp8-RB | 1090 | CG3260-RB | 28..1071 | 17..1060 | 5130 | 99.4 | Plus |
| Zfrp8-RA | 1306 | CG3260-RA | 28..1071 | 17..1060 | 5130 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24134480..24135170 | 370..1060 | 3395 | 99.4 | Plus |
| 2R | 25286936 | 2R | 24134016..24134284 | 17..285 | 1330 | 99.6 | Plus |
| 2R | 25286936 | 2R | 24134340..24134426 | 284..370 | 420 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:48:41 has no hits.
BS19770.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:49 Download gff for
BS19770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zfrp8-RA | 12..1054 | 17..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:36 Download gff for
BS19770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zfrp8-RA | 28..1070 | 17..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:47 Download gff for
BS19770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zfrp8-RA | 28..1070 | 17..1059 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:47 Download gff for
BS19770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24134016..24134284 | 17..285 | 99 | -> | Plus |
| 2R | 24134342..24134426 | 286..370 | 98 | -> | Plus |
| 2R | 24134481..24135169 | 371..1059 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:36 Download gff for
BS19770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20021539..20021807 | 17..285 | 99 | -> | Plus |
| arm_2R | 20021865..20021949 | 286..370 | 98 | -> | Plus |
| arm_2R | 20022004..20022692 | 371..1059 | 99 | | Plus |
BS19770.pep Sequence
Translation from 16 to 1059
> BS19770.pep
MEIDLGFAEKSDNGAWLSNRYFPSKLGGQPAWLELEALPPTSQLQCSKCR
APKSFLAQLYAPFEDEYNFHRSIYVFLCRNSDCQEAQNASNFTVLRSQLP
RKNKFFSEEEPSDVGQPLPAVPCLKKLCAACGCHAPHACSKCKAIHYCSP
EHQRAHWPQHKPNCGAPEVATEKPLTQIVFPEFEIVMDSNPVESGEEDKD
DEARLAEFQELESSGKTGDLSNVSEAEMDKYFGNSAAADDKTFRQFKKQT
AAEPDQIVRYKRGGQPLWITNTVKTVEDQLNKLPNCIACGGERQFEFQIM
PQALTLLEDENLDWGVLAVYTCAKSCPIDGYVEELLIKQDIVAEDQS*
BS19770.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zfrp8-PB | 347 | CG3260-PB | 1..347 | 1..347 | 1874 | 100 | Plus |
| Zfrp8-PA | 347 | CG3260-PA | 1..347 | 1..347 | 1874 | 100 | Plus |
