BS19772.complete Sequence
899 bp assembled on 2011-01-04
GenBank Submission: KX805772
> BS19772.complete
GAAGTTATCAGTCGACATGGCAGCTGCACTGCCAGATCGGTTTAGTGCGG
GCAAACGGCAGTTCTGGCGCGAGTTTCTGGCCCTTTATCAGGGAATGCCA
GAGCTGTGGGACGTCCACCACCTCAATTACCGGAACAAGGAGTTGCGAAA
CCGGGCGTACGAGTTGCTGGAGAGGAAACTACGGGAGATACAGCCGAACG
CTACGCGCACAGAAGTCGGCAGGCGCATCAACATATTTCGCACCAATTAC
AGGCGGGAGCAGATGCGAATCCTCAAGCAGAAGGAGCTGGGGCTGCACTC
TGATCTCTGTAAGCCGACGCTCTGGTTCTACGACTACATGGGATTTCTCC
TCACCCAGGAGACCTTCCAGCACAGGACCAGAAAAGGTCGGGGCGGCAGA
CAGAAGCAAGATTTTCGCAGGGAAAAGGATGACAAATACCCCTTGAAAAA
TCCAGATCTCAACACGGAAAGCGTTTGTGATTGGCCGATCAAGGATGATA
ACGCTTTCAACTACCAGTCCGAACCGACTGCCCCGCAATCCGAAGAGGGT
TCCCTGCTCAGTCCAAAATTGGAGATCATAGAGCCGGAAGAAGGGCAGTG
TGAAGTCAAAGAGGAAAATAGTTTGGGAAATTCATTGGAAACGAAAGAAC
CCACATCCTCGATTCAAACAGATCCCGAGAACGAACGAGGAACTGCACCC
ATGCAACTCAGCGAGTCCTCCGAAGTTCTGGCCAGATCCTGGGCTATCCA
GTACGAGGAAATGTCCCCCACGCAACGGATTCTGGCACGAAAGGCCATCG
CAGACATCCTGTTTGAGGGATGCATGGGCAACTTGCGAGTAAACCGCGGC
GAACAACAGAGCACCGTGGCAAATCATTTCTAAAAGCTTTCTAGACCAT
BS19772.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3386-RD | 867 | CG3386-PD | 1..867 | 17..883 | 4245 | 99.3 | Plus |
| CG3386-RC | 867 | CG3386-PC | 1..867 | 17..883 | 4245 | 99.3 | Plus |
| CG3386-RB | 867 | CG3386-PB | 1..867 | 17..883 | 4245 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3386-RD | 1494 | CG3386-RD | 206..1073 | 17..884 | 4250 | 99.3 | Plus |
| CG3386-RC | 1508 | CG3386-RC | 446..1313 | 17..884 | 4250 | 99.3 | Plus |
| CG3386-RB | 1446 | CG3386-RB | 384..1251 | 17..884 | 4250 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 680857..681310 | 884..431 | 2240 | 99.6 | Minus |
| 3L | 28110227 | 3L | 681372..681786 | 431..17 | 2015 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:48:50 has no hits.
BS19772.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:50 Download gff for
BS19772.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3386-RA | 338..1202 | 17..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:38 Download gff for
BS19772.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3386-RB | 384..1248 | 17..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:50 Download gff for
BS19772.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3386-RB | 384..1248 | 17..881 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:50 Download gff for
BS19772.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 680860..681310 | 431..881 | 99 | <- | Minus |
| 3L | 681373..681786 | 17..430 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:38 Download gff for
BS19772.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 680860..681310 | 431..881 | 99 | <- | Minus |
| arm_3L | 681373..681786 | 17..430 | 99 | | Minus |
BS19772.pep Sequence
Translation from 16 to 882
> BS19772.pep
MAAALPDRFSAGKRQFWREFLALYQGMPELWDVHHLNYRNKELRNRAYEL
LERKLREIQPNATRTEVGRRINIFRTNYRREQMRILKQKELGLHSDLCKP
TLWFYDYMGFLLTQETFQHRTRKGRGGRQKQDFRREKDDKYPLKNPDLNT
ESVCDWPIKDDNAFNYQSEPTAPQSEEGSLLSPKLEIIEPEEGQCEVKEE
NSLGNSLETKEPTSSIQTDPENERGTAPMQLSESSEVLARSWAIQYEEMS
PTQRILARKAIADILFEGCMGNLRVNRGEQQSTVANHF*
BS19772.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:48:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3386-PD | 288 | CG3386-PD | 1..288 | 1..288 | 1524 | 100 | Plus |
| CG3386-PC | 288 | CG3386-PC | 1..288 | 1..288 | 1524 | 100 | Plus |
| CG3386-PB | 288 | CG3386-PB | 1..288 | 1..288 | 1524 | 100 | Plus |
| CG3386-PA | 288 | CG3386-PA | 1..288 | 1..288 | 1524 | 100 | Plus |
| CG5180-PC | 355 | CG5180-PC | 10..132 | 14..147 | 161 | 29.1 | Plus |
