Clone BS19773 Report

Search the DGRC for BS19773

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:197
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptCG10268-RA
Protein status:BS19773.pep: full length peptide match
Sequenced Size:602

Clone Sequence Records

BS19773.complete Sequence

602 bp assembled on 2011-01-04

GenBank Submission: KX806068

> BS19773.complete
GAAGTTATCAGTCGACATGATGAAAATTGTACTCATCAGCGGCAAGCGAA
AGTGCGGCAAGGATTACATATCCGAGAGGCTGCAGCGGAGATTGGGCTCC
CGGTCGTGTATCGTTCGAATCTCAGAGCCCATTAAGTCGGAATGGGCTCG
CAAGCTGCAGTTGGACCTGGACGCTCTCCTCGGTGATGGACCCTACAAGG
AGAAGTACCGGCGCGACATGATTGTGTGGAGCGACGAGGTGCGGGCCCAG
GACTACGGCTACTTCTGCCGCGTGGCCATGGAGGAGGCGCTGAGTCGCCA
GCAGACGCCCTACATTCTTGTCAGCGATGTGCGGCGCAAGAACGACATCA
GGTGGTTCCGGGAGACTTACGGGCCGGAACGAGTCATCACCTTGCGTCTA
ACATCCCGTCCAGAAACGCGGTCTGCACGGGGATGGACCTTTACCGCAGG
AATAGACGATGTTCCCTCCGAGTGCGATCTGGATGATCTGGCCGACGGCT
TCGACGTGGTGTTGGCCAACGACGAGGAACTCGACCAGGAGGCCATCGAC
ATTCTGCTGGATAGGCTGCAGCTGCAGTATCGATAGAAGCTTTCTAGACC
AT

BS19773.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG10268-RA 570 CG10268-PA 1..570 17..586 2835 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG10268-RA 1156 CG10268-RA 222..792 17..587 2840 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19579457..19579955 587..89 2480 99.8 Minus
2L 23513712 2L 19580057..19580130 90..17 370 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:50:46 has no hits.

BS19773.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:54 Download gff for BS19773.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 217..786 17..586 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:53 Download gff for BS19773.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 222..791 17..586 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:27 Download gff for BS19773.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 222..791 17..586 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:27 Download gff for BS19773.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19579458..19579953 91..586 99 <- Minus
2L 19580057..19580130 17..90 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:53 Download gff for BS19773.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19579458..19579953 91..586 99 <- Minus
arm_2L 19580057..19580130 17..90 100   Minus

BS19773.pep Sequence

Translation from 16 to 585

> BS19773.pep
MMKIVLISGKRKCGKDYISERLQRRLGSRSCIVRISEPIKSEWARKLQLD
LDALLGDGPYKEKYRRDMIVWSDEVRAQDYGYFCRVAMEEALSRQQTPYI
LVSDVRRKNDIRWFRETYGPERVITLRLTSRPETRSARGWTFTAGIDDVP
SECDLDDLADGFDVVLANDEELDQEAIDILLDRLQLQYR*

BS19773.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG10268-PA 189 CG10268-PA 1..189 1..189 983 100 Plus