BS19774.complete Sequence
683 bp assembled on 2011-01-04
GenBank Submission: KX801688
> BS19774.complete
GAAGTTATCAGTCGACATGGAGAGCCTGTACCACCAAACCAACAATGTGG
TAAAGGACATCGAGCGCGATTTCCAGCGACTGAGTCAGCTCAGTGCCCAG
GAATCGCTTGACGTGGAAAACGGCATTCAATTGAAGATTACCCAGGCGAA
CGCCAACTGCGATCGGTTGGATGTGCTGCTGTATAAGGTGCCACCTTCGC
AGCGACAAAGCTCCAAACTTCGTGTGGATCAGCTGAAATATGACCTGAGA
CACCTGCAGACATCACTGCAGACGGCGCGGGAACGAAGACAGCGACGAAT
GCAGGAGATCTCCGAGAGGGAACAGCTGCTGAATCACAGATTCACGGCAA
ACAGCGCGCAGCCGGAGGAAACGCGCCTGCAATTGGACTACGAACTGCAG
CATCATACGCAGCTGGGTAACGCCCATCGGGGTGTGGATGACATGATTGC
CTCGGGCAGCGGCATTCTCGAGAGCCTGATCTCGCAGAGAATGACGCTGG
GCGGAGCGCACAAGAGAATCCAGGCGATAGGCAGCACACTGGGTCTGTCC
AATCACACGATGAAACTTATTGAACGCCGGCTGGTCGAAGATCGTCGGAT
ATTCATCGGAGGAGTGGTGGTCACCTTGCTTATCATCGCCCTGATCATCT
ATTTCCTAGTGCTCTAAAAGCTTTCTAGACCAT
BS19774.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Membrin-RA | 651 | CG4780-PA | 1..651 | 17..667 | 3165 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Membrin-RA | 858 | CG4780-RA | 141..795 | 13..667 | 3185 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5366806..5367318 | 155..667 | 2505 | 99.2 | Plus |
3L | 28110227 | 3L | 5366595..5366735 | 13..153 | 690 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:50:56 has no hits.
BS19774.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:55 Download gff for
BS19774.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
membrin-RA | 115..763 | 17..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:55 Download gff for
BS19774.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
membrin-RA | 145..793 | 17..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:30 Download gff for
BS19774.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Membrin-RA | 145..793 | 17..665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:30 Download gff for
BS19774.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5366599..5366735 | 17..153 | 99 | -> | Plus |
3L | 5366805..5367316 | 154..665 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:55 Download gff for
BS19774.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5359699..5359835 | 17..153 | 99 | -> | Plus |
arm_3L | 5359905..5360416 | 154..665 | 99 | | Plus |
BS19774.pep Sequence
Translation from 16 to 666
> BS19774.pep
MESLYHQTNNVVKDIERDFQRLSQLSAQESLDVENGIQLKITQANANCDR
LDVLLYKVPPSQRQSSKLRVDQLKYDLRHLQTSLQTARERRQRRMQEISE
REQLLNHRFTANSAQPEETRLQLDYELQHHTQLGNAHRGVDDMIASGSGI
LESLISQRMTLGGAHKRIQAIGSTLGLSNHTMKLIERRLVEDRRIFIGGV
VVTLLIIALIIYFLVL*
BS19774.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Membrin-PA | 216 | CG4780-PA | 1..216 | 1..216 | 1073 | 100 | Plus |