BS19775.complete Sequence
587 bp assembled on 2011-01-04
GenBank Submission: KX804092
> BS19775.complete
GAAGTTATCAGTCGACATGTACCAGCTGGAGAAGATCTGGGTCCTGCTGT
GCCTGGCCCTCGTCGGTGTCCTTGGCTTCGGCCAGTTCCACATGAAGCAC
TATCAGCTGCAGCGTAACTACAATACGCAGGAGGATTCCGGCGAGAATGA
CAATAGTGTGCTGCGAACCTTTCGCCGCTGCATGTGGGAGCAGTCGAAGT
TTCTGCCCCGCCGCCTCGTCCTTTTGAGCCTGTGCTCGAATCTCTTCTGC
GAGAACAATCACATAATGCCCCGTTCCAGGTCTATTTTCGTAGTGGAAAA
AATGTCTAGGCCGAATGACTGCCTGGACATCCTGCCCGAGCAATGCGAGC
AGGGCGATGAGGAGGAGCTGATGTACAAGCCCTTCCCCGACTGCTGTCCG
GTTTATTGCAACCTGAAGCGTCGGATGCAGCGCCTGCGCACCATGCACTT
CCGGCACCGCCTGCTGCGCAACAAACAGGACGGCTCAGCGGGATCCGCTG
GCGGTGGATCCGCTGGTGGCGACGGTCCCAATAACTCGCTCCTCAGTGAG
TTTGTCTACAACAACTACTAGAAGCTTTCTAGACCAT
BS19775.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:51:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1552-RC | 555 | CG1552-PC | 1..555 | 17..571 | 2775 | 100 | Plus |
| CG1552-RA | 555 | CG1552-PA | 1..555 | 17..571 | 2775 | 100 | Plus |
| CG1552-RB | 516 | CG1552-PB | 1..263 | 17..279 | 1315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1552-RC | 1060 | CG1552-RC | 68..626 | 13..571 | 2780 | 99.8 | Plus |
| CG1552-RA | 837 | CG1552-RA | 28..586 | 13..571 | 2780 | 99.8 | Plus |
| CG1552-RB | 798 | CG1552-RB | 28..294 | 13..279 | 1320 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11052605..11052857 | 571..319 | 1265 | 100 | Minus |
| X | 23542271 | X | 11053034..11053187 | 318..165 | 770 | 100 | Minus |
| X | 23542271 | X | 11053337..11053489 | 165..13 | 750 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:51:07 has no hits.
BS19775.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:55 Download gff for
BS19775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1552-RA | 32..586 | 17..571 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:57 Download gff for
BS19775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1552-RA | 32..586 | 17..571 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:34 Download gff for
BS19775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1552-RA | 32..586 | 17..571 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:34 Download gff for
BS19775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11052605..11052857 | 319..571 | 100 | <- | Minus |
| X | 11053034..11053187 | 165..318 | 100 | <- | Minus |
| X | 11053338..11053485 | 17..164 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:57 Download gff for
BS19775.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10947067..10947220 | 165..318 | 100 | <- | Minus |
| arm_X | 10947371..10947518 | 17..164 | 100 | | Minus |
| arm_X | 10946638..10946890 | 319..571 | 100 | <- | Minus |
BS19775.pep Sequence
Translation from 16 to 570
> BS19775.pep
MYQLEKIWVLLCLALVGVLGFGQFHMKHYQLQRNYNTQEDSGENDNSVLR
TFRRCMWEQSKFLPRRLVLLSLCSNLFCENNHIMPRSRSIFVVEKMSRPN
DCLDILPEQCEQGDEEELMYKPFPDCCPVYCNLKRRMQRLRTMHFRHRLL
RNKQDGSAGSAGGGSAGGDGPNNSLLSEFVYNNY*
BS19775.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1552-PC | 184 | CG1552-PC | 1..184 | 1..184 | 1004 | 100 | Plus |
| CG1552-PA | 184 | CG1552-PA | 1..184 | 1..184 | 1004 | 100 | Plus |
| CG1552-PB | 171 | CG1552-PB | 1..171 | 1..184 | 910 | 92.4 | Plus |
