BS19787.complete Sequence
950 bp assembled on 2011-01-04
GenBank Submission: KX803386
> BS19787.complete
GAAGTTATCAGTCGACATGAGCTTTAATTTAAGTCTGCGGCCCCCCATCC
GCCTCCTGGTGGACCTGGTCCTGCTGGGCCTACTTATTGTCCTGGTGGAG
AACTTCCGTCGCTTGTGGGGGCCTCCGACGAAGCGTGGTTTCTTCTGTGA
TGACGAGTCCTTAATGTATCCCTACCACGAAAACACAGTGAGCCCCACGC
TGCTCCACTGGCTGGGACTGTACCTTCCACTGATCAGTCTGGTCGTCCTT
GAAAGCTTTCTCAGCCACCGGAAGGACATGGCCCCCTGGCCAACACTATG
GCCGGTGTACAACACTGTGCGCTGGTTCCTTTACGGCTACGTATCCAACG
ACCTGCTCAAGGGAATCGGAAAGCAGGCACTTGGGCGACTGAGGCCCCAC
TTCTTTGCCGTGTGCAGTCCACATTTCCCGGACGGCTCCAGCTGCTTAGA
TGAGTCGCATCGAGGTGCTCTGAAATACCACACAGACTACGAGTGTCGGC
CAAATCTTTCGCAAGCCACCGAGGAAATGATTCGTGACGTAAACGTGTCC
TTTCCCAGCGGCCATTCCGCCATGGCTTTCTACGGCTTGGTGTTTGTGGC
GCTGCACCTGCGCCGCCGCCGCTGGCCTCTCCGTGGATCCTTGCTTAGTC
CTGTGCTGCAGCTAGCTTGCGTGGCTCTGGCCTGGTTCGTGGCCATCAGC
CGGGTCATCGACTACAAACACCACTGGTCGGATGTTGCGGCCGGTTCGCT
GTTGGGTGCCGGGAGCGCCCTTGCGGTTACTCGGGCTGCCGCGTCCGAGG
AGCTACAATGGAGGTGCCAGGATTCACTGGCGAGTGCGAAGCAGGAGGCT
GCAGTGGTCGATGTGGCCGACGTCAAAGGGGGCCAACAGATGCCGCATGA
TTTGTCTCTAGTTACGTGCCACATCTCTAATTAGAAGCTTTCTAGACCAT
BS19787.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:52:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11425-RA | 918 | CG11425-PA | 1..918 | 17..934 | 4590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11425-RA | 998 | CG11425-RA | 39..956 | 17..934 | 4590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22474833..22475750 | 17..934 | 4590 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:51:59 has no hits.
BS19787.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:55:58 Download gff for
BS19787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11425-RA | 39..956 | 17..934 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:02 Download gff for
BS19787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11425-RA | 39..956 | 17..934 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:51 Download gff for
BS19787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11425-RA | 39..956 | 17..934 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:51 Download gff for
BS19787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22474833..22475750 | 17..934 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:02 Download gff for
BS19787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22467933..22468850 | 17..934 | 100 | | Plus |
BS19787.pep Sequence
Translation from 16 to 933
> BS19787.pep
MSFNLSLRPPIRLLVDLVLLGLLIVLVENFRRLWGPPTKRGFFCDDESLM
YPYHENTVSPTLLHWLGLYLPLISLVVLESFLSHRKDMAPWPTLWPVYNT
VRWFLYGYVSNDLLKGIGKQALGRLRPHFFAVCSPHFPDGSSCLDESHRG
ALKYHTDYECRPNLSQATEEMIRDVNVSFPSGHSAMAFYGLVFVALHLRR
RRWPLRGSLLSPVLQLACVALAWFVAISRVIDYKHHWSDVAAGSLLGAGS
ALAVTRAAASEELQWRCQDSLASAKQEAAVVDVADVKGGQQMPHDLSLVT
CHISN*
BS19787.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11425-PA | 305 | CG11425-PA | 1..305 | 1..305 | 1624 | 100 | Plus |
| wun-PC | 364 | CG8804-PC | 92..343 | 20..255 | 454 | 38.8 | Plus |
| wun-PA | 300 | CG8804-PA | 13..263 | 20..254 | 453 | 38.9 | Plus |
| wun-PB | 379 | CG8804-PB | 92..342 | 20..254 | 453 | 38.9 | Plus |
| CG11426-PA | 340 | CG11426-PA | 37..282 | 12..252 | 440 | 40.6 | Plus |
