BS19821.complete Sequence
791 bp assembled on 2011-01-04
GenBank Submission: KX801600
> BS19821.complete
GAAGTTATCAGTCGACATGTCCAAAATATTCACGCCCACAAATCAAATAC
GCCTCACAAATGTCGCCATTGTGAGGCTAAAAAAAGGTGGCAAGCGATTT
GAGATCGCCTGCTATAAAAATAAGGTTCTTTCGTGGAGGAGCAACAGCGA
AAAGGACATCGATGAGGTCCTGCAAACCCATACCGTGTTCACCAATGTCT
CCAAAGGACAGGCGGCCAAAAAGGACGAGCTGCAAAAGGCCTTCAATAAA
ACAGACGAGACTGAGATTTGCAAGGAGATCCTCAGCAAAGGAGAACTGCA
GGTGTCGGAAAAGGAGCGCCAAAGTTGTCTGGACACGCAACTAAATAGTA
TAGTTAATTCCGTGGCTGCGTTGTGTGTAAATCCAGAGACGCGTCGTCCA
TATCCCGCCTCCATCATCGAGAAATCCCTGAAGGATGCCCACTTCTCCGT
TAAGATGAACAGGAACACCAAGCAGAACACACTGGAGGCCATCAAGATTC
TCAAGGACCATATGCCCATCGAGAGGTCGCGCATGAAGCTGCGCGTTAGC
TTTGCTGGAAAGGAGGGCGGTGGCAAGCTCAAGGAATCGGTGGTCAAGTT
GGCCAACGCAGTGGAGCACGAGGAATGGGACGAGGCCACCTTGCACTTAA
CCTTGCTCATAGATCCTGGCCAATATCGTGTCATTGATGAGCTGGTAAGG
AACGAAACGAAGGGTAAGGGACTGCTGGAGCTGCTCGAGCTGAAGGAAGT
GGTGGAGAGCGAGGAACTCTTCTAGAAGCTTTCTAGACCAT
BS19821.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:18:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8549-RB | 759 | CG8549-PB | 1..759 | 17..775 | 3795 | 100 | Plus |
| CG8549-RA | 759 | CG8549-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:18:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8549-RB | 882 | CG8549-RB | 40..798 | 17..775 | 3795 | 100 | Plus |
| CG8549-RA | 1037 | CG8549-RA | 195..953 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:18:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6753316..6753945 | 146..775 | 3150 | 100 | Plus |
| 3L | 28110227 | 3L | 6753107..6753237 | 17..147 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:18:26 has no hits.
BS19821.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:56:06 Download gff for
BS19821.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8549-RA | 195..953 | 17..775 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:32 Download gff for
BS19821.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8549-RA | 195..953 | 17..775 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:35 Download gff for
BS19821.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8549-RA | 195..953 | 17..775 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:35 Download gff for
BS19821.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6753107..6753237 | 17..147 | 100 | -> | Plus |
| 3L | 6753318..6753945 | 148..775 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:32 Download gff for
BS19821.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6746207..6746337 | 17..147 | 100 | -> | Plus |
| arm_3L | 6746418..6747045 | 148..775 | 100 | | Plus |
BS19821.pep Sequence
Translation from 16 to 774
> BS19821.pep
MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDE
VLQTHTVFTNVSKGQAAKKDELQKAFNKTDETEICKEILSKGELQVSEKE
RQSCLDTQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVKMNRN
TKQNTLEAIKILKDHMPIERSRMKLRVSFAGKEGGGKLKESVVKLANAVE
HEEWDEATLHLTLLIDPGQYRVIDELVRNETKGKGLLELLELKEVVESEE
LF*
BS19821.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8549-PB | 252 | CG8549-PB | 1..252 | 1..252 | 1271 | 100 | Plus |
| CG8549-PA | 252 | CG8549-PA | 1..252 | 1..252 | 1271 | 100 | Plus |
