Clone BS19824 Report

Search the DGRC for BS19824

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:198
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG4447-RA
Protein status:BS19824.pep: full length peptide match
Sequenced Size:797

Clone Sequence Records

BS19824.complete Sequence

797 bp assembled on 2011-01-04

GenBank Submission: KX802047

> BS19824.complete
GAAGTTATCAGTCGACATGCTGCGAAGTGCACTGCATTTAGCTGCCCTAG
GAGTGCGCCAGACGCGAGTGTCGAGCTCCTCACCGAAATTACCTCTAATC
CTGCAAAATAATCTAGAAAACACGAAATATCTACAAGTGGCGCGCGATTA
TGCAAAGGGCAAGGACAAAAAGAAGGAAAAAGGCGGCAAGGGAAAGCCGG
GCAAGGTGGAAATCAATGAGCAGCAGCTGCGCGAGATCCTCAATTTCGAT
GGCCTGAATAGCCAGATGCAGAAGTCCGTGATGCAGATGAAGGAGGATTT
TGTGAAGCACCTGTCGCTGCGATCCACCAGCGGTGCCATCGACACACTGC
GCATCAAAGTCGATGGCCAGGAGCACGAGCTGCAGGAACTGGCCCAAATC
TCTCGCAAGAATCCCAAGACCATCATAGTCAACATGATTGGCTTCCCGCA
AACGATTCCCGATGTCCTCAAAGCCATCGAAAAGAGTGGCATGAACCTTA
ATCCCCAACAGGATGGCACTACACTGTTCATACCCATCCCAAAGGTCACC
AAGGAGCACAGGGAAAATCTATCCAAGAATGCCAAAGCTCTGTTCGTCAA
ATATCGCGATGCCATACGAGGCGTTCAGAACGAACACATTCGCAAGCTGA
AAAAACAACCGGAACTTGGCAAGGATGATGCCTTCGCCGCACAGGCTCAG
GTCACTGCCATCGCGGATCGCTTCATCTCGGAGGCGGACAAGTTGCTGGC
CAGCAAGCAGAAGGAGCTGCTGGGCGATTAGAAGCTTTCTAGACCAT

BS19824.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:52:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG4447-RA 765 CG4447-PA 1..765 17..781 3825 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG4447-RA 891 CG4447-RA 68..832 17..781 3825 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9364417..9365181 17..781 3825 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:52:50 has no hits.

BS19824.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:56:00 Download gff for BS19824.complete
Subject Subject Range Query Range Percent Splice Strand
CG4447-RA 59..823 17..781 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:11 Download gff for BS19824.complete
Subject Subject Range Query Range Percent Splice Strand
CG4447-RA 68..832 17..781 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:05 Download gff for BS19824.complete
Subject Subject Range Query Range Percent Splice Strand
CG4447-RA 68..832 17..781 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:05 Download gff for BS19824.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9364417..9365181 17..781 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:11 Download gff for BS19824.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9357517..9358281 17..781 100   Plus

BS19824.pep Sequence

Translation from 16 to 780

> BS19824.pep
MLRSALHLAALGVRQTRVSSSSPKLPLILQNNLENTKYLQVARDYAKGKD
KKKEKGGKGKPGKVEINEQQLREILNFDGLNSQMQKSVMQMKEDFVKHLS
LRSTSGAIDTLRIKVDGQEHELQELAQISRKNPKTIIVNMIGFPQTIPDV
LKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAKALFVKYRDAI
RGVQNEHIRKLKKQPELGKDDAFAAQAQVTAIADRFISEADKLLASKQKE
LLGD*

BS19824.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG4447-PA 254 CG4447-PA 1..254 1..254 1268 100 Plus