BS19844.complete Sequence
1427 bp assembled on 2011-01-04
GenBank Submission: KX803713
> BS19844.complete
GAAGTTATCAGTCGACATGCATAGTGCTGACTTAACTAGCCACACCGATG
TGACGGAAACCACCAATCTTGCCGCCATTGAGCAGTTGAAGGAACAGCGA
TTCAACGAGAAGAATCTGATCATATACAATCCGCCTGGAGAGAATGACGA
ACTTTCCGCCAGATTCCTGCGCAGCCTAGCTTTTGCCACCTTCAAGCGAA
GATCGCCCGCATTTTTGAGGGATTTGATCACATTCCTACAGGATCGTGAG
GCGGATATAATTGAACAGTGCGGGGACTATGCCCATTTCGATTTGAAGCG
CACCATCTGGAGCCTGGAGCTGCTGCGCGATGATATAATCAACAACAGGG
AGTTCCAGATAATTCGCGTCAAGTCGCCGGACACTGACAGCTGGAACTCG
TTCCTCAAGGGTCTTGGAGAGGACAGAAGGCAGTGGTTTTCGGCAATTTG
GCTGCATGCGGATTGCTACATGTACCGCCGCATTTGGTCGATCTTCCAGC
GATCCGAAACCCTGAAAAATTATGATTACTTCGGTGATCAAAAGACGTCC
ATTGTTACCAATGTGGCGCCACTGATGAGGGACATCCTAGTCTCAACCAA
AGGCATTAAGCGCAGCCAGGAGGACTTTCAGTATCTCCTAAAACTATCTA
CGTGGTCCAATCACGGTGACCTAAACATCACAAGAAGGGGTGCGCATGAC
AAAATCTATAAACAGATTGCCAAATACGACATTGATTTGCTGGCGGATCA
GTCGTTCGATGTTTGGCAGGATCTCATCGAGGCCAGTGCGCCCGTCTACG
TGGACATCGTGTGCGACAATGCGGGATTTGAGCTCTTTGCGGATCTGCTG
CTGGGCGAGTACATCATAGAATCGGGCTTGGCCAGTCGGGTGCGGTTCCA
TGTGAAGGCTATACCGTGGTTCATCTCGGATTGCACGCACAAGGACTTTA
ACTGGCTAGTAAAGTTTCTACGCAAGCACGAGTTCCAGGAATTGAATGCC
TTTGGTAAGCGGATACGTGGCTATATCAGGGATCGTTCCTTTATCCTGTG
CGACAAAAGCTACTTCTGGACAAGTGGTCACGACTACAGCCAGATGAAGC
GGGTGCAACCTTGCCTGTATGTCTACATTAGCCAGGCATCCCTGGTGATC
TTTAAAGGAGATCTCAACTACCGGAAACTGCTCGGCGACATCAACAACAA
ACCCACTACCCAGTTTTCCGACTGCCTGCGCGGCTTTCAACCATCCAGCG
TCTGTGCCCTGCGCGTCATTAAGTCCGATATCTATTGTGGACTGCCCATC
TGCACGGTGGAGAAGCTAAGCGAGGAGAATCCCGAGTGGATGGTCACTGG
CGACAAGGCCGTCGTACAGGTGGCCATCAAGCATCGACTCTCGAGTGACA
TTATCGTTTGAAAGCTTTCTAGACCAT
BS19844.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:17:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11475-RA | 1395 | CG11475-PA | 1..1395 | 17..1411 | 6975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:17:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11475-RA | 1562 | CG11475-RA | 104..1503 | 13..1412 | 6985 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:17:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22069784..22071183 | 1412..13 | 6985 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:17:02 has no hits.
BS19844.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:56:02 Download gff for
BS19844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11475-RA | 108..1501 | 17..1410 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:18 Download gff for
BS19844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11475-RA | 108..1501 | 17..1410 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:13 Download gff for
BS19844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11475-RA | 108..1501 | 17..1410 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:13 Download gff for
BS19844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22069786..22071179 | 17..1410 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:18 Download gff for
BS19844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17957291..17958684 | 17..1410 | 100 | | Minus |
BS19844.pep Sequence
Translation from 16 to 1410
> BS19844.pep
MHSADLTSHTDVTETTNLAAIEQLKEQRFNEKNLIIYNPPGENDELSARF
LRSLAFATFKRRSPAFLRDLITFLQDREADIIEQCGDYAHFDLKRTIWSL
ELLRDDIINNREFQIIRVKSPDTDSWNSFLKGLGEDRRQWFSAIWLHADC
YMYRRIWSIFQRSETLKNYDYFGDQKTSIVTNVAPLMRDILVSTKGIKRS
QEDFQYLLKLSTWSNHGDLNITRRGAHDKIYKQIAKYDIDLLADQSFDVW
QDLIEASAPVYVDIVCDNAGFELFADLLLGEYIIESGLASRVRFHVKAIP
WFISDCTHKDFNWLVKFLRKHEFQELNAFGKRIRGYIRDRSFILCDKSYF
WTSGHDYSQMKRVQPCLYVYISQASLVIFKGDLNYRKLLGDINNKPTTQF
SDCLRGFQPSSVCALRVIKSDIYCGLPICTVEKLSEENPEWMVTGDKAVV
QVAIKHRLSSDIIV*
BS19844.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11475-PA | 464 | CG11475-PA | 1..464 | 1..464 | 2454 | 100 | Plus |
| CG11474-PC | 436 | CG11474-PC | 4..436 | 26..455 | 837 | 40.3 | Plus |
| CG11474-PA | 436 | CG11474-PA | 4..436 | 26..455 | 837 | 40.3 | Plus |
| CG4161-PB | 484 | CG4161-PB | 21..443 | 39..451 | 754 | 35.9 | Plus |
| CG4161-PA | 484 | CG4161-PA | 21..443 | 39..451 | 754 | 35.9 | Plus |
