BS19845.complete Sequence
1019 bp assembled on 2011-01-04
GenBank Submission: KX800394
> BS19845.complete
GAAGTTATCAGTCGACATGAATGCCAGTGAGAACTATTTCACGATGGACC
CCACAGAGAATATATCCCAGGTCTTAGACCAGAACAGAAACAACACAAAT
AGCCTGCGAACACATCCCACTGTGGAAGAGTATTATGAGAACATGACCGC
CTTCCTCAGCCTGGCCATCTTCATAGCCAGCCTGCTGACCATCCTCAACA
TCAGCATCTTCGCAACGACAGTCTCTCGGCTGCGTCGTCACCTGGACAAG
CCGCTGCTGGGTCCCTCGATTATGATGGTGGGCCTGTATCCGATTATCTC
GGTGGCTGCCCTGGTTACCATTCTGGTGCCGTACTCCTGGTTCATCTGCC
ATACGGTGATGCACGTTATGTTTATGGTCGGCGGACCTGTCTTCCGCACC
CTGCTCTTTCGTTACGTGGGCTCGGAGCAGAATTACGTGAAGGAGACGGC
CGGCGAGGCGGTGCAACTAAATACTCCTCCGTGCTGTTGCTGCTGCCTCT
GCCTGCCGATGGTGATTCCCACCAAGGCGAAACTCTGCATCTCCAGATAC
ATGGTATGGCAAATGCCCTTCTGGCAGGGCTCCATTATGCTGGTGATGAA
CATCCTATACTACCGGGACATTCAGCTCTACCGGCAGGTCATGTTCTTCT
TCATCCCCTTCATCGTCTGCTCCATTGTCTTGGGCGCTTGGTCCCTCCAA
ATCACTGTGCGGATGATCACGAAGGTGCGCGGGGACTATCAGCTGAGAAA
GAAGATGTTCTGCCTCCAACTGGTGGTGATGCTTTGCAAACTGCAGTACC
TGGTACTCTATGATCAGCTGGACGGCATCAAAATGGGTGGGGAGTATCCC
ATTAATCACACCGTCTACAAGCAAACTATCATCAACATCCTTATCCTGGT
TGAAATGGTTCTCGTATCCATGATGGTTCAAAGTGCATATCGTACTCCCG
TTCAGGTGCAAATCGATGAGGTTAACAAGGAAAAGGAAGTTACTCGCATT
TGAAAGCTTTCTAGACCAT
BS19845.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:17:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6836-RA | 987 | CG6836-PA | 1..987 | 17..1003 | 4935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:17:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6836-RA | 1309 | CG6836-RA | 252..1238 | 17..1003 | 4935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:17:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18954254..18954671 | 141..558 | 2090 | 100 | Plus |
3L | 28110227 | 3L | 18954924..18955115 | 684..875 | 960 | 100 | Plus |
3L | 28110227 | 3L | 18954728..18954859 | 553..684 | 660 | 100 | Plus |
3L | 28110227 | 3L | 18955208..18955335 | 876..1003 | 640 | 100 | Plus |
3L | 28110227 | 3L | 18953763..18953886 | 17..140 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:17:13 has no hits.
BS19845.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-05 08:56:03 Download gff for
BS19845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6836-RA | 249..1234 | 17..1002 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:20 Download gff for
BS19845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6836-RA | 252..1237 | 17..1002 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:16 Download gff for
BS19845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6836-RA | 252..1237 | 17..1002 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:16 Download gff for
BS19845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18953763..18953886 | 17..140 | 100 | -> | Plus |
3L | 18954254..18954666 | 141..553 | 100 | -> | Plus |
3L | 18954729..18954859 | 554..684 | 100 | -> | Plus |
3L | 18954925..18955115 | 685..875 | 100 | -> | Plus |
3L | 18955208..18955334 | 876..1002 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:20 Download gff for
BS19845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18946863..18946986 | 17..140 | 100 | -> | Plus |
arm_3L | 18947354..18947766 | 141..553 | 100 | -> | Plus |
arm_3L | 18947829..18947959 | 554..684 | 100 | -> | Plus |
arm_3L | 18948025..18948215 | 685..875 | 100 | -> | Plus |
arm_3L | 18948308..18948434 | 876..1002 | 100 | | Plus |
BS19845.pep Sequence
Translation from 16 to 1002
> BS19845.pep
MNASENYFTMDPTENISQVLDQNRNNTNSLRTHPTVEEYYENMTAFLSLA
IFIASLLTILNISIFATTVSRLRRHLDKPLLGPSIMMVGLYPIISVAALV
TILVPYSWFICHTVMHVMFMVGGPVFRTLLFRYVGSEQNYVKETAGEAVQ
LNTPPCCCCCLCLPMVIPTKAKLCISRYMVWQMPFWQGSIMLVMNILYYR
DIQLYRQVMFFFIPFIVCSIVLGAWSLQITVRMITKVRGDYQLRKKMFCL
QLVVMLCKLQYLVLYDQLDGIKMGGEYPINHTVYKQTIINILILVEMVLV
SMMVQSAYRTPVQVQIDEVNKEKEVTRI*
BS19845.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6836-PA | 328 | CG6836-PA | 1..328 | 1..328 | 1708 | 100 | Plus |