BS19886.complete Sequence
509 bp assembled on 2012-04-25
GenBank Submission: KX801506
> BS19886.complete
GAAGTTATCAGTCGACATGGGACAGGGCAAAACAGATCTGGCCAAAGATG
AATTCGGACGCGTAGCTGCTCGCGACACCCATCAAATAGCCGAGGCTCAA
CAGCAGAAGAACGCCAGGCTGCGCGAGGCCTTCAACATATCCGAGTACTT
TGTCGAGGGCAGCAGCTTCGACGGTGATCGCAAGGCGAAGGAGGACCTGG
CCAAAAGCGTGGCTCTCCAAAAGGAACTGGACGCCCAGCGCGAGAGCCTG
GCAGCGGCGGCAGCTGCCGCAGCAGCCGGCAAGGACAAGGAGACCGGGAA
GCGGTATGCCCTAGTGCGTACTCCTTCCCGCGAACGGGATCGCGATGCTG
GCGATGCGGCAGCCAATGGCGACGAACGCGATCATGTCTCCAAGACGGAC
AAGAAGAAGCGCAAGAAGCGCGCCAGAGAGAGTTCGGCCAGTCCTGAGCG
CAAGAAGAAGAAGAAGTCGAAGAAGCACAAGAAAGAGAGGTAAAAGCTTT
CTAGACCAT
BS19886.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7971-RB | 477 | CG7971-PB | 1..477 | 17..493 | 2385 | 100 | Plus |
| CG7971-RH | 525 | CG7971-PH | 1..474 | 17..490 | 2370 | 100 | Plus |
| CG7971-RG | 3189 | CG7971-PG | 292..764 | 17..489 | 2365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:20:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7971-RB | 1187 | CG7971-RB | 205..681 | 17..493 | 2385 | 100 | Plus |
| CG7971-RH | 936 | CG7971-RH | 205..678 | 17..490 | 2370 | 100 | Plus |
| CG7971-RG | 4204 | CG7971-RG | 513..985 | 17..489 | 2365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:20:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1661227..1661592 | 432..67 | 1830 | 100 | Minus |
| 3L | 28110227 | 3L | 1663920..1663969 | 66..17 | 250 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:20:49 has no hits.
BS19886.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:55 Download gff for
BS19886.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7971-RB | 190..664 | 17..491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:56 Download gff for
BS19886.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7971-RB | 205..679 | 17..491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:19 Download gff for
BS19886.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7971-RB | 205..679 | 17..491 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:19 Download gff for
BS19886.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1663920..1663969 | 17..66 | 100 | | Minus |
| 3L | 1661227..1661592 | 67..432 | 100 | <- | Minus |
| 3L | 1661107..1661165 | 433..491 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:56 Download gff for
BS19886.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1661107..1661165 | 433..491 | 100 | <- | Minus |
| arm_3L | 1661227..1661592 | 67..432 | 100 | <- | Minus |
| arm_3L | 1663920..1663969 | 17..66 | 100 | | Minus |
BS19886.pep Sequence
Translation from 16 to 492
> BS19886.pep
MGQGKTDLAKDEFGRVAARDTHQIAEAQQQKNARLREAFNISEYFVEGSS
FDGDRKAKEDLAKSVALQKELDAQRESLAAAAAAAAAGKDKETGKRYALV
RTPSRERDRDAGDAAANGDERDHVSKTDKKKRKKRARESSASPERKKKKK
SKKHKKER*
BS19886.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7971-PB | 158 | CG7971-PB | 1..158 | 1..158 | 785 | 100 | Plus |
| CG7971-PH | 174 | CG7971-PH | 1..158 | 1..158 | 785 | 100 | Plus |
| CG7971-PG | 1062 | CG7971-PG | 98..254 | 1..157 | 780 | 100 | Plus |
| CG7971-PA | 1062 | CG7971-PA | 98..254 | 1..157 | 780 | 100 | Plus |
| CG7971-PC | 1107 | CG7971-PC | 98..254 | 1..157 | 780 | 100 | Plus |
