BS19919.complete Sequence
1913 bp assembled on 2011-01-28
GenBank Submission: KX800582
> BS19919.complete
GAAGTTATCAGTCGACATGGATAAGTTGTCGATCGAACAGAAGATTTTCA
TCCGTCGCTCGGACGGTAGAGTCCACTTGGCGGAGATTATCAAACTGGAG
GGCGGTGACTCCAAGCTGATTACGGTGGAGTGGCCCGAAGGACATACGGT
GCGTGGTAAGGAACTGCCCCTGGAGCTGGTGGTCCTGATGAATCCTCATA
TCTTCGACTCGCCCCGCTGCAGTGGCGGCAATGCGGCGTCAGCCAATCAA
ACTGCCTCCATATCGCCACGTTCAATGAAACAACGAATAGCGACTGGGAG
CTTATCTCCTGTACTGGCCACTGCCCCGCCACGCCAGCAGACGGCGCCGC
CAGTTCGAGAGGACGAGGTGGTGCACCAGGCTGAAAGAATGCGAAAAGAA
CGGGAACGGAGGCGAGAAGCACAAGCCAGGACTCGTCTAGATCGGGAGCA
GGGGAAGAACGAAGATCCGGGAAATCCCAACTGGGAAGTAGCCAGAATGA
TACGACTGCAACGCGAGCAAATGGAGAGTCAGCGGGTGAGAAGTGGTACT
ACGAACGAACGAATCAATTGCCACCAAATTATGGTTTGTGTGAGGAAGAG
ACCACTGAGGCGCAAGGAGCTGGCTGACCGGGAACAGGATGTGGTCAGCA
TTCCGTCTAAGCACACATTGGTGGTCCACGAGCCCCGCAAGCATGTGAAC
CTGGTCAAGTTCCTGGAAAATCATAGCTTCCGTTTCGATTACGTCTTCGA
CGAGGAGTGCTCCAATGCCACGGTCTACGAATTCACAGCCCGACCCTTGA
TAAAGCACATTTTTGATGGCGGAATGGCCACGTGTTTCGCCTACGGACAA
ACTGGAAGCGGCAAGACCTATACGATGGGTGGTCAGTTCCCCGGAAGGCA
TCAGAGCTCAATGGATGGCATCTATGCAATGGCCGCTAAGGACGTGTTCT
CCACTCTAAAGACGGTTCCCTATAACAAGCTTAATCTGAAAGTTTACTGC
AGCTTCTTCGAGATCTACGGCACCCGGGTGTTCGATCTCCTGATGCCTGG
CAAGCCACAACTGCGTGTCTTGGAGGATAGAAACCAGCAGGTGCAAGTGG
TGGGCCTCACCCAGAATCCAGTACAGAACACCGCCGAAGTTCTGGACCTA
CTCGAGTTGGGCAATAGTGTCCGAACCTCGGGTCACACCTCTGCCAATTC
CAAGTCCTCCCGATCGCATGCTGTGTTCCAAATCGTGCTGAGATCCGCGG
CGGGCGAGAAGCTACACGGGAAATTCTCGCTTATAGATCTGGCCGGGAAT
GAAAGAGGAGCGGACAACAGCTCGGCGGATCGACAGACGCGCCTGGAAGG
ATCCGAGATCAATAAATCGCTGCTGGTCCTCAAGGAATGCATTCGCGCTC
TGGGGCGCCAGTCGAGTCATTTGCCATTCCGTGGCTCCAAGCTGACCCAA
GTCCTGCGGGACTCCTTCATCGGAGGTAAGAAGGTGAAAACCTGCATGAT
AGCCATGATCTCGCCATGCTTGCATTCGGTGGAGCATACCTTGAACACGC
TGCGTTATGCGGATCGGGTGAAGGAACTAAGTGTGGAGTCGATCCCATCT
AAACGGATGCCCGATGCCAACCTTGGAAGCACTTCCATGTCAGATATTGT
TTGCCAGTCGTCCACCCAGCGACTCTTTCCATGTGCCTCCTCCACATCGA
TGCCAGGTGGTGGCAACCAAGCGCAGCAACACACCAACACCGCGAACGAC
TTGAACAGATCCCAGAAACCAACATCTAAGCCCACTTATCCCACATCCGG
TCAGCAGCTGGTCCAGAGGAAGGGAAGCTCCCAACGGGAGGCCTCCATGA
TGCTGACCAAATCCCTGGCACAATTCCGAGGGCGCAACTTTCCCTAAAAG
CTTTCTAGACCAT
BS19919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:32:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp59C-RA | 1881 | CG3219-PA | 1..1881 | 17..1897 | 9405 | 100 | Plus |
| Klp59D-RA | 2190 | CG12192-PA | 1450..1697 | 1328..1575 | 475 | 79.4 | Plus |
| Klp10A-RF | 2418 | CG1453-PF | 1313..1826 | 1059..1575 | 430 | 73.6 | Plus |
| Klp59D-RA | 2190 | CG12192-PA | 828..983 | 706..861 | 270 | 78.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:33:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp59C-RA | 2120 | CG3219-RA | 135..2018 | 16..1899 | 9420 | 100 | Plus |
| Klp59D-RA | 2499 | CG12192-RA | 1617..1864 | 1328..1575 | 475 | 79.4 | Plus |
| Klp10A-RF | 4467 | CG1453-RF | 1744..2257 | 1059..1575 | 430 | 73.6 | Plus |
| Klp59D-RA | 2499 | CG12192-RA | 995..1150 | 706..861 | 270 | 78.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:32:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23124025..23125908 | 1899..16 | 9420 | 100 | Minus |
| 2R | 25286936 | 2R | 23143615..23143862 | 1328..1575 | 475 | 79.4 | Plus |
| X | 23542271 | X | 11132822..11133335 | 1575..1059 | 430 | 73.6 | Minus |
| 2R | 25286936 | 2R | 23142993..23143148 | 706..861 | 270 | 78.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:32:57 has no hits.
BS19919.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:01 Download gff for
BS19919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp59C-RA | 136..2014 | 17..1895 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:03:41 Download gff for
BS19919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp59C-RA | 136..2014 | 17..1895 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:21:44 Download gff for
BS19919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp59C-RA | 136..2014 | 17..1895 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:21:44 Download gff for
BS19919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23124029..23125907 | 17..1895 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:03:41 Download gff for
BS19919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19011552..19013430 | 17..1895 | 100 | | Minus |
BS19919.pep Sequence
Translation from 16 to 1896
> BS19919.pep
MDKLSIEQKIFIRRSDGRVHLAEIIKLEGGDSKLITVEWPEGHTVRGKEL
PLELVVLMNPHIFDSPRCSGGNAASANQTASISPRSMKQRIATGSLSPVL
ATAPPRQQTAPPVREDEVVHQAERMRKERERRREAQARTRLDREQGKNED
PGNPNWEVARMIRLQREQMESQRVRSGTTNERINCHQIMVCVRKRPLRRK
ELADREQDVVSIPSKHTLVVHEPRKHVNLVKFLENHSFRFDYVFDEECSN
ATVYEFTARPLIKHIFDGGMATCFAYGQTGSGKTYTMGGQFPGRHQSSMD
GIYAMAAKDVFSTLKTVPYNKLNLKVYCSFFEIYGTRVFDLLMPGKPQLR
VLEDRNQQVQVVGLTQNPVQNTAEVLDLLELGNSVRTSGHTSANSKSSRS
HAVFQIVLRSAAGEKLHGKFSLIDLAGNERGADNSSADRQTRLEGSEINK
SLLVLKECIRALGRQSSHLPFRGSKLTQVLRDSFIGGKKVKTCMIAMISP
CLHSVEHTLNTLRYADRVKELSVESIPSKRMPDANLGSTSMSDIVCQSST
QRLFPCASSTSMPGGGNQAQQHTNTANDLNRSQKPTSKPTYPTSGQQLVQ
RKGSSQREASMMLTKSLAQFRGRNFP*
BS19919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp59C-PA | 626 | CG3219-PA | 1..626 | 1..626 | 3220 | 100 | Plus |
| Klp59D-PA | 729 | CG12192-PA | 1..567 | 1..521 | 1371 | 51.7 | Plus |
| Klp10A-PF | 805 | CG1453-PF | 132..615 | 64..526 | 1323 | 56.6 | Plus |
| Klp10A-PC | 805 | CG1453-PC | 132..615 | 64..526 | 1323 | 56.6 | Plus |
| Klp10A-PB | 805 | CG1453-PB | 132..615 | 64..526 | 1323 | 56.6 | Plus |
