BS19920.complete Sequence
635 bp assembled on 2011-01-07
GenBank Submission: KX803975
> BS19920.complete
GAAGTTATCAGTCGACATGGAACGCTGGCATGATCGCGTGGCTGTGGTCA
CGGGTGCCAGCTCCGGGATAGGAGCTGCAGTGGCACGCCACTTGGTGAGT
GCAGGGGTCATTGTTGTAGGTCTGGCCCGTCGGGTCGACCGCATGAAGGC
TATCAAGGAACAACTGCCGCCGGAGCTGCAGGGCCGCCTGCATGCCATCC
ACTGCGATGTCGAAGATCTGGACTCGGTGACGGCTGCCTTTGACTGGATC
GAGGAGCAGCTCGGCGGATGTGACATCCTGGTGAACAACGCGGGATGCCT
GAACCCCGGACAACTTCTCACCCTGGAGCTAGAGCAGCTGCAGCAGGTCC
TGAACGTGAACTTGATGGGCGTGGTCATCTGCACCCGCCGCGCCTTTCGC
TCAATGCAGCAACGCGAGGTGGATGGCCATGTGATCCTCATTAACAGCCT
AACGGGCCGTAACATCATCAATCCACCTGGTGACGAGCTGCAGGTGCTCA
ACATGTATCCGCTTACCAAGCACGGGGTTACGGCCATGTTGGAAGTCCTG
CGACAGGAGCTGCGCGGATTCAAGACTAAGATAAAGGTCACAGTGAGTGC
ACAAAAATCGATCAAATAGAAGCTTTCTAGACCAT
BS19920.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:26:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40486-RC | 744 | CG40486-PC | 1..576 | 17..592 | 2880 | 100 | Plus |
| CG40486-RB | 744 | CG40486-PB | 1..576 | 17..592 | 2880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:26:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40486-RC | 960 | CG40486-RC | 127..702 | 17..592 | 2880 | 100 | Plus |
| CG40486-RB | 940 | CG40486-RB | 127..702 | 17..592 | 2880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22959363..22959965 | 619..17 | 3015 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:25:59 has no hits.
BS19920.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:41 Download gff for
BS19920.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40486-RA | 112..708 | 17..613 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:52 Download gff for
BS19920.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40486-RA | 112..708 | 17..613 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:10 Download gff for
BS19920.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40486-RB | 127..702 | 17..592 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:10 Download gff for
BS19920.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22959369..22959965 | 17..613 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:52 Download gff for
BS19920.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 22361205..22361801 | 17..613 | 100 | | Minus |
BS19920.pep Sequence
Translation from 16 to 618
> BS19920.pep
MERWHDRVAVVTGASSGIGAAVARHLVSAGVIVVGLARRVDRMKAIKEQL
PPELQGRLHAIHCDVEDLDSVTAAFDWIEEQLGGCDILVNNAGCLNPGQL
LTLELEQLQQVLNVNLMGVVICTRRAFRSMQQREVDGHVILINSLTGRNI
INPPGDELQVLNMYPLTKHGVTAMLEVLRQELRGFKTKIKVTVSAQKSIK
*
BS19920.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40486-PC | 247 | CG40486-PC | 1..192 | 1..192 | 979 | 100 | Plus |
| CG40486-PB | 247 | CG40486-PB | 1..192 | 1..192 | 979 | 100 | Plus |
| CG40485-PA | 231 | CG40485-PA | 1..194 | 1..194 | 604 | 59.3 | Plus |
| CG40485-PB | 247 | CG40485-PB | 1..192 | 1..192 | 596 | 58.9 | Plus |
| antdh-PA | 250 | CG1386-PA | 1..192 | 1..192 | 543 | 54.7 | Plus |
